Parental gene:

SMEK2, ENSLAFG00000017825

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_52:6394153..6459159(+)


>ENSLAFG00000017825
ATGTCGGATACGCGGCGGCGAGTGAAGGTGTACACCCTGAACGAGGACCGGCAATGGGACGACCGAGGCACCGGGCACGT
CTCCTCCACCTACGTGGAGGAGCTCAAGGGGATGTCGCTGCTGGTTCGCGCCGAGTCCGACGGATCACTACTCTTGGAAT
CAAAGATAAATCCAAACACTGCGTATCAGAAACAACAGGCAAGAGACACATTAATTGTTTGGTCAGAAGCTGAGAACTAT
GACCTGGCTCTAAGTTTTCAGGAGAAAGCTGGCTGTGATGAGATTTGGGAAAAAATCTGTCAGGTTCAAGGTAAGGACCC
ATCAGTGGAAGTCACACAGGACCTCATCGATGAATCAGAAGAAGAACGCTTTGAGGAAATGCCTGAAACCAGTCATCTGA
TTGACCTGCCCACATGTGAACTCAATAAACTTGAAGAGATAGCTGACTTAGTTACCTCGGTTCTCTCCTCACCTATCCGT
AGAGAAAAGCTGGCTCTGGCCTTGGAAAATGAAGGCTATATTAAAAAACTACTGCAGCTGTTCCAAGCGTGTGAGAACCT
AGAAAACACTGAAGGCTTACACCATTTGTATGAAATTATTAGAGGAATCTTATTCCTAAATAAGGCAACTCTGTTTGAGG
TAATGTTTTCTGACGAGTGTATCATGGATGTCGTAGGATGCCTCGAATATGACCCTGCCCTGGCTCAGCCAAAAAGGCAT
AGAGAATTCTTGACCAAAACTGCGAAGTTTAAGGAAGTTATACCAATAACAGACTCTGAACTAAGACAAAAAATACATCA
GACTTACAGGGTACAGTACATTCAGGACATCATTTTGCCTACACCATCCGTTTTTGAAGAGAATTTTCTTTCTACTCTCA
CGTCTTTTATTTTCTTCAACAAAGTTGAGATAGTCAGCATGTTGCAGGAAGATGAGAAGTTTTTGTCTGAAGTTTTTGCA
CAATTAACAGATGAGGCTACAGATGATGATAAACGGCGTGAATTGGTTAATTTTTTCAAGGAATTCTGTGCATTTTCTCA
GACATTACAACCTCAAAACAGGGATGCATTTTTCAAAACTTTGGCAAAATTGGGGATTCTTCCAGCTCTTGAAATTGTAA
TGGGCATGGATGATTTGCAAGTCAGATCCGCTGCCACAGATATATTTTCTTACCTGGTAGAGTTTAGTCCATCTATGGTC
AGAGAATTCGTCATGCAAGAAGCCCAGCAGAGCGATGACGATATCCTTCTCATTAACGTAATAATTGAACAAATGATCTG
TGACACCGATCCTGAGCTAGGAGGCGCTGTCCAGCTAATGGGACTTCTACGAACTCTAATTGATCCAGAGAACATGCTGG
CCACAACTAATAAAACTGAAAAAAGTGAATTTCTGAATTTCTTCTACAACCATTGTATGCATGTCCTCACAGCACCACTT
TTGGCCAATACTTCAGAAGACAAATATGAAAAGGATAATATAGTTGGATCTAACAAAAACAACACAGTTTGTCCAGATAA
TTATCAAACAGCACAGCTGCTTGCCTTAATTTTAGAGTTACTCACATTCTGTGTGGAACATCACACATACCACATCAAAA
ACTACATCATGAACAAAGACTTGCTAAGAAGAGTGTTGGTCTTGATGAATTCAAAGCATACCTTCCTGGCTTTGTGTGCC
CTTCGCTTTATGAGGCGGATAATTGGCCTTAAAGACGAATTCTATAACCGGTACATCACCAAGGGAAATCTTTTTGAGCC
AGTTGTAAATGCTCTTCTGGATAACGGGACTCGGTACAATCTGTTGAATTCAGCCGTGGTTGAGTTGTTTGAATTTATAA
GAGTGGAAGATATCAAGTCTCTCACTGCCCATATAGTTGAAAACTTTTATAAGGCACTTGAATCGATTGAATATGTTCAG
ACATTCAAAGGACTGAAGACTAAATATGAGCAAGAGAAAGACAGACAAAATCAGAAACTCAACAGTGTACCATCTATATT
GCGTAGTAACAGATTTCGCAGAGACGCGAAAGCCTTGGAAGAGGACGAAGAAATGTGGTTTAATGAAGACGAAGAGGAGG
AAGGAAAAGCAGTTGTGGCACCAGTGGAAAAATCTAAGCCGGAAGATGATTTTCCAGACAGTTATGAAAAATTTATGGAG
ACTAAAAAAGCAAAGGAAAGTGAAGACAAGGAAAACCTCCCCAAAAGGACATCTTCTGGTGGCTTCAAATTTACTTTCTC
CCACTCCGCCAGTGCTGCTAACGGAACTAACAGTGCAAACAGTAAATCTGTAGTGGCTCCCACATCACCAGCAAGTTCAA
ATGGATCGTCTTCCAAAACTACAGGTCTGGCTGCGTCAGTAACAGCCTCCAAGGGAAGTTTGGTTGGCTTAGTGGATTAT
CCAGACGATGAAGAGGAAGATGAAGAAGAAGAGACATCCCCCAGGAAGAGACCTCGTCTTGGCTCATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003843 ortholog_one2many 1 retrogene
retro_amel_48,
Bos taurus ENSBTAG00000000545 ortholog_one2many 1 retrogene
retro_btau_232,
Canis familiaris ENSCAFG00000002860 ortholog_one2many 1 retrogene
retro_cfam_226,
Equus caballus ENSECAG00000013819 ortholog_one2many 1 retrogene
retro_ecab_23,
Echinops telfairi ENSETEG00000002420 ortholog_one2one 1 retrogene
retro_etel_1699,
Felis catus ENSFCAG00000026457 ortholog_one2many 1 retrogene
retro_fcat_13,
Homo sapiens ENSG00000138041 ortholog_one2one 1 retrogene
retro_hsap_4799,
Myotis lucifugus ENSMLUG00000003875 ortholog_one2many 1 retrogene
retro_mluc_994,
Macaca mulatta ENSMMUG00000007001 ortholog_one2many 1 retrogene
retro_mmul_238,
Mustela putorius furo ENSMPUG00000002435 ortholog_one2many 1 retrogene
retro_mputfur_92,
Nomascus leucogenys ENSNLEG00000009338 ortholog_one2one 1 retrogene
retro_nleu_1112,
Oryctolagus cuniculus ENSOCUG00000006880 ortholog_one2many 1 retrogene
retro_ocun_9,
Otolemur garnettii ENSOGAG00000009837 ortholog_one2many 1 retrogene
retro_ogar_140,
Pan troglodytes ENSPTRG00000011933 ortholog_one2one 1 retrogene
retro_ptro_3191,
Sus scrofa ENSSSCG00000008398 ortholog_one2one 1 retrogene
retro_sscr_1187,
Ictidomys tridecemlineatus ENSSTOG00000006276 ortholog_one2many 1 retrogene
retro_itri_63,
Tursiops truncatus ENSTTRG00000000027 ortholog_one2one 1 retrogene
retro_ttru_1397,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_791 69.93 93.07
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Download FASTA sequences of all ENSLAFG00000017825 retrocopies