Parental gene:

PSMB6, ENSLAFG00000012859

Aliases:None
Description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:G3TA84]
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_47:10353726..10355132(-)


>ENSLAFG00000012859
TCTTCCCAGACCACTATCATGGCTGTGCAATTTGACGGGGGCGTGGTTCTGGGGGCCGACTCCAGAACGACCACTGGGTC
CTACATCGCCAATCGAGTGACTGACAAGCTGACCCCTATTCACGACCGAATATTCTGCTGCCGCTCGGGCTCAGCAGCTG
ATACCCAGGCAGTAGCTGATGCTGTCACTTATCAGCTTGGCTTCCACAGCATTGAACTGAATGAGCCTCCGCTGGTGCAC
ACGGCAGCCAGCCTGTTTAAGGAGATGTGTTACCGATACCGGGAAGACTTGATGGCAGGAATCATCATTGCGGGCTGGGA
CCCCCAAGAAGGAGGGCAGGTGTACTCAGTACCCATGGGGGGTATGATGGTAAGGCAGTCCTTTGCCATTGGAGGCTCAG
GGAGCTCCTATATCTATGGCTATGTCGATGCTACCTACCGGGAGGGCATGACCAAGGAAGAGTGTCTGCATTTCACTGCC
AATGCTCTCGCTTTGGCCATGGAACGGGATGGCTCCAGTGGAGGGGTGATCCGCCTAGCAGCCATTGCAGAATCAGGGGT
AGAGCGGCAGGTACTTTTGGGAGACCAGATCCCCAAATTCGCCATTGCCACTTTACCGCCCCCCTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016075 ortholog_one2one 1 retrogene
retro_amel_1834,
Bos taurus ENSBTAG00000013390 ortholog_one2one 2 retrogenes
retro_btau_1734, retro_btau_534,
Canis familiaris ENSCAFG00000015855 ortholog_one2one 1 retrogene
retro_cfam_2173,
Callithrix jacchus ENSCJAG00000012010 ortholog_one2one 1 retrogene
retro_cjac_775,
Felis catus ENSFCAG00000008036 ortholog_one2one 2 retrogenes
retro_fcat_1813, retro_fcat_1995,
Macropus eugenii ENSMEUG00000010676 ortholog_one2one 1 retrogene
retro_meug_621,
Microcebus murinus ENSMICG00000014854 ortholog_one2one 2 retrogenes
retro_mmur_140, retro_mmur_718,
Monodelphis domestica ENSMODG00000005554 ortholog_one2many 1 retrogene
retro_mdom_799,
Mus musculus ENSMUSG00000018286 ortholog_one2one 2 retrogenes
retro_mmus_348, retro_mmus_3569,
Otolemur garnettii ENSOGAG00000009653 ortholog_one2one 1 retrogene
retro_ogar_2114,
Pteropus vampyrus ENSPVAG00000006048 ortholog_one2one 1 retrogene
retro_pvam_618,
Rattus norvegicus ENSRNOG00000019551 ortholog_one2many 1 retrogene
retro_rnor_56,
Sorex araneus ENSSARG00000006615 ortholog_one2one 1 retrogene
retro_sara_689,
Ictidomys tridecemlineatus ENSSTOG00000014871 ortholog_one2one 1 retrogene
retro_itri_514,
Tarsius syrichta ENSTSYG00000010674 ortholog_one2one 1 retrogene
retro_tsyr_1807,
Tursiops truncatus ENSTTRG00000000566 ortholog_one2one 1 retrogene
retro_ttru_405,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_874 71.77 100.00
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Download FASTA sequences of all ENSLAFG00000012859 retrocopies