Parental gene:

PSMB6, ENSFCAG00000008036

Aliases:None
Description:proteasome (prosome, macropain) subunit, beta type, 6 [Source:HGNC Symbol;Acc:9543]
Organism:Cat (Felis catus)
Coordinates:E1:1750955..1753105(-)


>ENSFCAG00000008036
ATGGCGGCCACCTTAGTATCCGCTGGAGGAGCGGGGTCTGTCCCAGCCTGGGGTCCCGAGGCTATTGCCCCCGACTGGGA
AAGCCGGGAAGTCTCCACAGGGACCACTATCATGGCCGTGCAGTTTGAAGGGGGCGTGGTTCTTGGAGCCGACTCCAGAA
CTACCACTGGGTCCTACATTGCCAATCGAGTGACTGACAAGCTGACCCCTATTCATGACCGTATCTTCTGCTGCCGCTCA
GGCTCAGCAGCAGATACCCAGGCAGTAGCTGATGCTGTCACGTATCAACTCGGTTTCCACAGCATTGAGCTAAATGAGCC
TCCGCTGGTGCACACAGCCGCCAGCCTCTTTAAGGAGATGTGTTACCGATACCGGGAAGACTTGATGGCGGGAATCATCA
TTGCGGGCTGGGACCCCCAAGAAGGAGGGCAGGTGTACTCGGTGCCCATGGGGGGCATGATGGTAAGACAGTCCTTTGCC
ATTGGGGGCTCTGGGAGCTCCTATATCTATGGCTATGTCGACGCTACCTACCGGGAAGGCATGACCAAGGAAGAGTGTCT
ACAATTCACGGCCAATGCCCTCGCTTTGGCCATGGAACGGGACGGCTCCAGCGGAGGTGTGATCCGCCTGGCGGCCATCG
AGGAGTCAGGGGTGGAGCGGCGGGTACTTTTGGGGGACCAGATTCCCAAATTCACCATCGCCACGTTACCGCCTCCCTGA

Library Parental gene expression (RPM)
SRP017611_brain 14 .12 RPM
SRP017611_kidney 27 .10 RPM
SRP017611_liver 16 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Loxodonta africana ENSLAFG00000012859 ortholog_one2one 1 retrogene
retro_lafr_874,
Macropus eugenii ENSMEUG00000010676 ortholog_one2one 1 retrogene
retro_meug_621,
Monodelphis domestica ENSMODG00000005554 ortholog_one2many 1 retrogene
retro_mdom_799,
Rattus norvegicus ENSRNOG00000019551 possible_ortholog 1 retrogene
retro_rnor_56,
Sorex araneus ENSSARG00000006615 ortholog_one2one 1 retrogene
retro_sara_689,
Ictidomys tridecemlineatus ENSSTOG00000014871 ortholog_one2one 1 retrogene
retro_itri_514,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1813 90.48 69.87
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2. retro_fcat_1995 73.55 64.85
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Download FASTA sequences of all ENSFCAG00000008036 retrocopies