Parental gene:

Psmb6, ENSMUSG00000018286

Aliases:Psmb6, Lmp19, Mpnd
Description:proteasome (prosome, macropain) subunit, beta type 6 [Source:MGI Symbol;Acc:MGI:104880]
Organism:Mouse (Mus musculus)
Coordinates:11:70525366..70527858(+)


>ENSMUSG00000018286
ATGGCGGCCGCCTTAGCTGTTCGTCGAGCGGGGTCTGCACCGGCCTTTGGGCCGGAGGCTCTCACCCCAGACTGGGAAAA
CCGGGAAGTCTCCACAGGGACCACGATCATGGCTGTGCAGTTTAATGGGGGCGTGGTTCTAGGAGCGGACTCCAGGACAA
CCACTGGGTCCTACATCGCCAATCGAGTGACTGACAAGCTGACCCCTATCCACGATCACATCTTCTGCTGCCGCTCAGGC
TCAGCCGCTGATACCCAAGCAGTGGCAGACGCTGTCACTTACCAGCTTGGTTTCCACAGTATTGAACTGAACGAGCCTCC
ACTAGTCCACACAGCCGCCAGTCTCTTTAAGGAGATGTGTTACCGGTACAGAGAAGATCTGATGGCAGGAATCATCATTG
CAGGCTGGGACCCTCAAGAAGGAGGGCAGGTGTACTCTGTTCCCATGGGGGGTATGATGGTAAGACAGTCCTTTGCCATC
GGAGGCTCCGGGAGCTCGTACATCTATGGCTATGTTGATGCTACGTATCGGGAAGGCATGACCAAGGACGAATGTCTGCA
GTTCACTGCCAATGCTCTCGCTTTGGCCATGGAACGCGACGGCTCCAGTGGAGGGGTGATCCGCTTGGCAGCCATTCAGG
AGTCAGGGGTAGAGCGGCAGGTGCTTTTGGGAGACCAAATCCCCAAGTTCACCATTGCCACGTTGCCACCTCCCTGA

Library Parental gene expression (RPM)
SRP007412_brain 44 .13 RPM
SRP007412_cerebellum 56 .01 RPM
SRP007412_heart 85 .73 RPM
SRP007412_kidney 73 .48 RPM
SRP007412_liver 78 .89 RPM
SRP007412_testis 103 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016075 ortholog_one2one 1 retrogene
retro_amel_1834,
Canis familiaris ENSCAFG00000015855 ortholog_one2one 1 retrogene
retro_cfam_2173,
Callithrix jacchus ENSCJAG00000012010 ortholog_one2one 1 retrogene
retro_cjac_775,
Loxodonta africana ENSLAFG00000012859 ortholog_one2one 1 retrogene
retro_lafr_874,
Macropus eugenii ENSMEUG00000010676 ortholog_one2one 1 retrogene
retro_meug_621,
Microcebus murinus ENSMICG00000014854 ortholog_one2one 2 retrogenes
retro_mmur_140, retro_mmur_718,
Monodelphis domestica ENSMODG00000005554 ortholog_one2many 1 retrogene
retro_mdom_799,
Rattus norvegicus ENSRNOG00000019551 ortholog_one2many 1 retrogene
retro_rnor_56,
Sorex araneus ENSSARG00000006615 ortholog_one2one 1 retrogene
retro_sara_689,
Tursiops truncatus ENSTTRG00000000566 ortholog_one2one 1 retrogene
retro_ttru_405,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_348 92.04 84.03
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2. retro_mmus_3569 82.43 100.00
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Download FASTA sequences of all ENSMUSG00000018286 retrocopies