Parental gene:

NDUFA2, ENSLACG00000005796

Aliases:None
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Source:UniProtKB/TrEMBL;Acc:H3AA68]
Organism:Coelacanth (Latimeria chalumnae)
Coordinates:JH128119.1:185601..188573(+)


>ENSLACG00000005796
ATGGCGACTGCGGTGGTTCGGAAAATCGGGTCAAACCTACGAGAACTGCGGATCCATTTGTGTCAGCGGTCGCAGAGCAG
CCAGGGGGTCCGAGAATTTATTGAGCAACAATATGTGACACTGAAGCAAGCAAATCCTGACTTTCCCATCCTGATCAGAG
AGTGCTCTGGCATTCAGCCCAAACTCTGGGCCCGATATGAGTTTGGAAAAGAGAAGAGTGTACCGCTACACAACCTGAAT
TCAGAGCAGGTGGCAAAGGCACTGGAGTCTGTCATCAAGAGCAAAGTGTGA

Library Parental gene expression (RPM)
DRP000627_gill 25 .07 RPM
DRP000627_kidney 40 .64 RPM
DRP000627_pectoral_fin 35 .47 RPM
DRP000627_pelvic_fin 40 .76 RPM
DRP000627_pharynx 27 .87 RPM
DRP000627_tail_muscle 18 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015041 ortholog_one2many 2 retrogenes
retro_btau_124, retro_btau_151,
Canis familiaris ENSCAFG00000005861 ortholog_one2one 1 retrogene
retro_cfam_1343,
Callithrix jacchus ENSCJAG00000016525 ortholog_one2one 1 retrogene
retro_cjac_3326,
Cavia porcellus ENSCPOG00000009178 ortholog_one2one 2 retrogenes
retro_cpor_1045, retro_cpor_1290,
Mus musculus ENSMUSG00000014294 ortholog_one2one 1 retrogene
retro_mmus_2579,
Nomascus leucogenys ENSNLEG00000009325 ortholog_one2many 1 retrogene
retro_nleu_67,
Otolemur garnettii ENSOGAG00000027727 ortholog_one2one 1 retrogene
retro_ogar_1633,
Pongo abelii ENSPPYG00000015860 ortholog_one2one 1 retrogene
retro_pabe_938,
Rattus norvegicus ENSRNOG00000017571 ortholog_one2many 1 retrogene
retro_rnor_262,
Sus scrofa ENSSSCG00000014371 ortholog_one2many 1 retrogene
retro_sscr_48,
Tupaia belangeri ENSTBEG00000005978 ortholog_one2many 1 retrogene
retro_tbel_2688,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lcha_48 69.23 80.21
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Download FASTA sequences of all ENSLACG00000005796 retrocopies