Parental gene:

HINT1, ENSGGOG00000011967

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:5:114527410..114533600(-)


>ENSGGOG00000011967
CCAGAGCCGGGGCACCTGCGCAGGCTTGGCTGCGCCCTCTCGCGCCGCACGCTCTGCGGGTTCCACCCTTCTTCCGAGCT
TCTCTGGCCGCCGCGCGGGAGAGAGGACGAGATGGCAGATGAGATTGCCAAGGCTCAGGTCGCTCGGCCTGGTGGCGACA
CGATCTTTGGGAAGATCATCCGCAAGGAAATACCAGCCAAAATCATTTTTGAGGATGACCGGTGCCTTGCTTTCCATGAC
ATTTCCCCTCAAGCACCAACACATTTTCTGGTGATACCCAAGAAACATATATCCCAGATTTCTGTGGCAGAAGATGATGA
TGAAAGTCTTCTTGGACACTTAATGATTGTTGGCAAGAAATGTGCTGCTGATCTGGGCCTGAATAAGGGTTATCGAATGG
TGGTGAATGAAGGTTCAGATGGTGGACAGTCTGTCTATCACGTTCATCTCCATGTTCTTGGAGGTCGGCAAATGCATTGG
CCTCCTGGTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 97 .01 RPM
SRP007412_cerebellum 55 .20 RPM
SRP007412_heart 41 .84 RPM
SRP007412_kidney 180 .61 RPM
SRP007412_liver 160 .98 RPM
SRP007412_testis 90 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017774 possible_ortholog 4 retrogenes
retro_amel_1426, retro_amel_1657, retro_amel_460, retro_amel_511,
Bos taurus ENSBTAG00000010959 possible_ortholog 5 retrogenes
retro_btau_1036, retro_btau_1149, retro_btau_1782, retro_btau_926, retro_btau_978,
Canis familiaris ENSCAFG00000032152 possible_ortholog 1 retrogene
retro_cfam_473,
Callithrix jacchus ENSCJAG00000014398 ortholog_many2many 3 retrogenes
retro_cjac_134, retro_cjac_142, retro_cjac_87,
Equus caballus ENSECAG00000023180 ortholog_one2many 3 retrogenes
retro_ecab_264, retro_ecab_356, retro_ecab_550,
Erinaceus europaeus ENSEEUG00000008175 ortholog_one2many 1 retrogene
retro_eeur_582,
Echinops telfairi ENSETEG00000010127 ortholog_many2many 1 retrogene
retro_etel_1,
Homo sapiens ENSG00000169567 ortholog_one2one 1 retrogene
retro_hsap_3913,
Gorilla gorilla ENSGGOG00000011265 within_species_paralog 1 retrogene
retro_ggor_1823,
Macropus eugenii ENSMEUG00000005368 ortholog_one2many 2 retrogenes
retro_meug_1001, retro_meug_848,
Myotis lucifugus ENSMLUG00000001091 possible_ortholog 2 retrogenes
retro_mluc_1388, retro_mluc_2100,
Macaca mulatta ENSMMUG00000009985 ortholog_one2one 2 retrogenes
retro_mmul_1896, retro_mmul_759,
Monodelphis domestica ENSMODG00000028727 ortholog_many2many 3 retrogenes
retro_mdom_102, retro_mdom_1741, retro_mdom_286,
Mustela putorius furo ENSMPUG00000011639 possible_ortholog 4 retrogenes
retro_mputfur_1337, retro_mputfur_1376, retro_mputfur_45, retro_mputfur_93,
Mus musculus ENSMUSG00000020267 ortholog_one2many 1 retrogene
retro_mmus_718,
Nomascus leucogenys ENSNLEG00000012431 ortholog_one2one 1 retrogene
retro_nleu_2155,
Oryctolagus cuniculus ENSOCUG00000006607 ortholog_many2many 5 retrogenes
retro_ocun_1374, retro_ocun_214, retro_ocun_643, retro_ocun_821, retro_ocun_968,
Otolemur garnettii ENSOGAG00000008850 ortholog_one2many 2 retrogenes
retro_ogar_1028, retro_ogar_1599,
Procavia capensis ENSPCAG00000004737 ortholog_one2many 1 retrogene
retro_pcap_407,
Pongo abelii ENSPPYG00000015747 ortholog_one2one 2 retrogenes
retro_pabe_3189, retro_pabe_909,
Pan troglodytes ENSPTRG00000017206 ortholog_one2one 1 retrogene
retro_ptro_2661,
Rattus norvegicus ENSRNOG00000000622 ortholog_many2many 1 retrogene
retro_rnor_98,
Sarcophilus harrisii ENSSHAG00000005834 ortholog_many2many 2 retrogenes
retro_shar_113, retro_shar_301,
Sus scrofa ENSSSCG00000014264 possible_ortholog 2 retrogenes
retro_sscr_371, retro_sscr_894,
Ictidomys tridecemlineatus ENSSTOG00000027920 ortholog_many2many 4 retrogenes
retro_itri_1129, retro_itri_114, retro_itri_177, retro_itri_260,
Tursiops truncatus ENSTTRG00000008653 possible_ortholog 4 retrogenes
retro_ttru_1364, retro_ttru_1660, retro_ttru_217, retro_ttru_349,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_89 89.68 77.30
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Download FASTA sequences of all ENSGGOG00000011967 retrocopies