Parental gene:

HINT1, ENSAMEG00000017774

Aliases:None
Description:histidine triad nucleotide binding protein 1 [Source:HGNC Symbol;Acc:4912]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL193483.1:267326..270667(-)


>ENSAMEG00000017774
AGCTTCTCCCCGGGGCGGTCGCGCGGGAGGGTGGCCGAGATGGCAGATGAGATCGCCAAGGCTCAGGCCGCGCGGCCTGG
TGGCGACACGATCTTCGGGAAGATCATTCGCAAGGAAATCCCAGCCAAAATCATTTTTGAGGATGACCAGTGTCTTGCTT
TCCATGACATTTCCCCTCAAGCACCAACTCATTTTCTGGTGATACCCAAGAAACATATATCCCAGATTTCTGTAGCGGAA
GATGATGATGAAAGTCTTCTTGGACATTTAATGATTGTTGGCAAGAAATGTGCTGCTGATCTGGGCCTGAAGAAGGGTTA
TCGAATGGTAGTGAATGAAGGTTCAGATGGGGGACAGTCTGTCTATCATGTTCATCTCCATGTTCTTGGAGGTCGGCAGA
TGAATTGGCCTCCTGGTTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010959 ortholog_one2one 5 retrogenes
retro_btau_1036, retro_btau_1149, retro_btau_1782, retro_btau_926, retro_btau_978,
Canis familiaris ENSCAFG00000032152 ortholog_one2one 1 retrogene
retro_cfam_473,
Callithrix jacchus ENSCJAG00000014398 possible_ortholog 3 retrogenes
retro_cjac_134, retro_cjac_142, retro_cjac_87,
Echinops telfairi ENSETEG00000010127 possible_ortholog 1 retrogene
retro_etel_1,
Gorilla gorilla ENSGGOG00000011967 possible_ortholog 1 retrogene
retro_ggor_89,
Macropus eugenii ENSMEUG00000005368 ortholog_one2one 2 retrogenes
retro_meug_1001, retro_meug_848,
Myotis lucifugus ENSMLUG00000001091 ortholog_one2many 2 retrogenes
retro_mluc_1388, retro_mluc_2100,
Monodelphis domestica ENSMODG00000028727 ortholog_one2many 3 retrogenes
retro_mdom_102, retro_mdom_1741, retro_mdom_286,
Mustela putorius furo ENSMPUG00000011639 ortholog_one2one 4 retrogenes
retro_mputfur_1337, retro_mputfur_1376, retro_mputfur_45, retro_mputfur_93,
Oryctolagus cuniculus ENSOCUG00000006607 possible_ortholog 5 retrogenes
retro_ocun_1374, retro_ocun_214, retro_ocun_643, retro_ocun_821, retro_ocun_968,
Rattus norvegicus ENSRNOG00000000622 possible_ortholog 1 retrogene
retro_rnor_98,
Sarcophilus harrisii ENSSHAG00000005834 ortholog_one2many 2 retrogenes
retro_shar_113, retro_shar_301,
Sus scrofa ENSSSCG00000014264 ortholog_one2one 2 retrogenes
retro_sscr_371, retro_sscr_894,
Ictidomys tridecemlineatus ENSSTOG00000027920 ortholog_one2many 4 retrogenes
retro_itri_1129, retro_itri_114, retro_itri_177, retro_itri_260,
Tursiops truncatus ENSTTRG00000008653 ortholog_one2one 4 retrogenes
retro_ttru_1364, retro_ttru_1660, retro_ttru_217, retro_ttru_349,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_460 55.86 99.28
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2. retro_amel_511 73.33 95.68
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3. retro_amel_1426 71.54 88.49
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4. retro_amel_1657 68.54 62.59
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Download FASTA sequences of all ENSAMEG00000017774 retrocopies