Parental gene:

TAGLN2, ENSG00000158710

Aliases:TAGLN2, HA1756
Description:transgelin 2 [Source:HGNC Symbol;Acc:11554]
Organism:Human (Homo sapiens)
Coordinates:1:159887896..159895522(-)


>ENSG00000158710
ATGGCCAACAGGGGACCTGCATATGGCCTGAGCCGGGAGGTGCAGCAGAAGATTGAGAAACAATATGATGCAGATCTGGA
GCAGATCCTGATCCAGTGGATCACCACCCAGTGCCGAAAGGATGTGGGCCGGCCCCAGCCTGGACGCGAGAACTTCCAGA
ACTGGCTCAAGGATGGCACGGTGCTATGTGAGCTCATTAATGCACTGTACCCCGAGGGGCAGGCCCCAGTAAAGAAGATC
CAGGCCTCCACCATGGCCTTCAAGCAGATGGAGCAGATCTCTCAGTTCCTGCAAGCAGCTGAGCGCTATGGCATTAACAC
CACTGACATCTTCCAAACTGTGGACCTCTGGGAAGGAAAGAACATGGCCTGTGTGCAGCGGACGCTGATGAATCTGGGTG
GGCTGGCAGTAGCCCGAGATGATGGGCTCTTCTCTGGGGATCCCAACTGGTTCCCTAAGAAATCCAAGGAGAATCCTCGG
AACTTCTCGGATAACCAGCTGCAAGAGGGCAAGAACGTGATCGGGTTACAGATGGGCACCAACCGCGGGGCGTCTCAGGC
AGGCATGACTGGCTACGGGATGCCACGCCAGATCCTCTGA

Library Parental gene expression (RPM)
bodymap2_adipose 206 .75 RPM
bodymap2_adrenal 217 .49 RPM
bodymap2_brain 28 .83 RPM
bodymap2_breast 144 .11 RPM
bodymap2_colon 198 .75 RPM
bodymap2_heart 72 .22 RPM
bodymap2_kidney 166 .19 RPM
bodymap2_liver 67 .98 RPM
bodymap2_lung 750 .90 RPM
bodymap2_lymph_node 234 .94 RPM
bodymap2_ovary 101 .72 RPM
bodymap2_prostate 180 .80 RPM
bodymap2_skeletal_muscle 27 .86 RPM
bodymap2_testis 93 .89 RPM
bodymap2_thyroid 68 .53 RPM
bodymap2_white_blood_cells 652 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002068 ortholog_one2one 1 retrogene
retro_btau_1701,
Callithrix jacchus ENSCJAG00000006156 ortholog_one2one 2 retrogenes
retro_cjac_2035, retro_cjac_2444,
Homo sapiens ENSG00000064666 within_species_paralog 16 retrogenes
retro_hsap_1168, retro_hsap_1575, retro_hsap_1697, retro_hsap_2127, retro_hsap_2495, retro_hsap_255, retro_hsap_2576, retro_hsap_2764, retro_hsap_3505, retro_hsap_4168, retro_hsap_4170, retro_hsap_4175, retro_hsap_4257, retro_hsap_4269, retro_hsap_4326, retro_hsap_943,
Homo sapiens ENSG00000117519 within_species_paralog 1 retrogene
retro_hsap_3419,
Macropus eugenii ENSMEUG00000006573 ortholog_one2one 9 retrogenes
retro_meug_1092, retro_meug_1242, retro_meug_128, retro_meug_1442, retro_meug_1998, retro_meug_309, retro_meug_483, retro_meug_690, retro_meug_880,
Myotis lucifugus ENSMLUG00000026228 ortholog_one2many 1 retrogene
retro_mluc_274,
Macaca mulatta ENSMMUG00000004705 ortholog_one2one 1 retrogene
retro_mmul_2328,
Monodelphis domestica ENSMODG00000010032 ortholog_one2one 1 retrogene
retro_mdom_1178,
Nomascus leucogenys ENSNLEG00000013350 ortholog_one2one 1 retrogene
retro_nleu_575,
Pongo abelii ENSPPYG00000000648 ortholog_one2one 2 retrogenes
retro_pabe_3310, retro_pabe_3364,
Pan troglodytes ENSPTRG00000001533 ortholog_one2one 1 retrogene
retro_ptro_2788,
Sus scrofa ENSSSCG00000006395 ortholog_one2one 2 retrogenes
retro_sscr_312, retro_sscr_313,
Tarsius syrichta ENSTSYG00000001645 ortholog_one2one 2 retrogenes
retro_tsyr_1911, retro_tsyr_950,
Tursiops truncatus ENSTTRG00000001814 ortholog_one2one 1 retrogene
retro_ttru_1614,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4108 95.24 85.45
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Download FASTA sequences of all ENSG00000158710 retrocopies