Parental gene:

DDA1, ENSG00000130311

Aliases:DDA1, C19orf58, PCIA1
Description:DET1 and DDB1 associated 1 [Source:HGNC Symbol;Acc:28360]
Organism:Human (Homo sapiens)
Coordinates:19:17420326..17434110(+)


>ENSG00000130311
ATGGCAGATTTTTTGAAAGGACTGCCTGTCTACAACAAAAGCAATTTTAGTCGATTTCACGCGGACTCCGTGTGCAAAGC
CTCGAACCGACGGCCCTCAGTCTACCTGCCTACCCGCGAGTACCCGTCTGAACAGATCATCGTGACAGAAAAGACAAACA
TCCTCCTGCGCTACCTGCATCAGCAATGGGACAAAAAGAACGCTGCCAAGAAGAGAGACCAGGAGCAAGTGGAGCTGGAA
GGCGAGAGCTCCGCACCTCCCCGCAAGGTGGCGCGGACCGACAGCCCAGACATGCACGAGGACACTTAA

Library Parental gene expression (RPM)
bodymap2_adipose 17 .37 RPM
bodymap2_adrenal 22 .13 RPM
bodymap2_brain 17 .72 RPM
bodymap2_breast 14 .44 RPM
bodymap2_colon 10 .19 RPM
bodymap2_heart 13 .24 RPM
bodymap2_kidney 14 .44 RPM
bodymap2_liver 11 .81 RPM
bodymap2_lung 15 .98 RPM
bodymap2_lymph_node 25 .89 RPM
bodymap2_ovary 13 .01 RPM
bodymap2_prostate 18 .72 RPM
bodymap2_skeletal_muscle 8 .55 RPM
bodymap2_testis 24 .92 RPM
bodymap2_thyroid 13 .95 RPM
bodymap2_white_blood_cells 21 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017068 ortholog_one2many 3 retrogenes
retro_btau_1152, retro_btau_536, retro_btau_74,
Canis familiaris ENSCAFG00000031251 ortholog_one2one 3 retrogenes
retro_cfam_1089, retro_cfam_2033, retro_cfam_475,
Cavia porcellus ENSCPOG00000006944 ortholog_one2one 1 retrogene
retro_cpor_435,
Felis catus ENSFCAG00000001001 ortholog_one2one 1 retrogene
retro_fcat_487,
Gorilla gorilla ENSGGOG00000005802 ortholog_one2one 1 retrogene
retro_ggor_1093,
Microcebus murinus ENSMICG00000001763 ortholog_one2one 1 retrogene
retro_mmur_1162,
Myotis lucifugus ENSMLUG00000003990 ortholog_one2one 1 retrogene
retro_mluc_1014,
Macaca mulatta ENSMMUG00000016231 ortholog_one2one 1 retrogene
retro_mmul_2248,
Nomascus leucogenys ENSNLEG00000005738 ortholog_one2one 2 retrogenes
retro_nleu_1427, retro_nleu_1428,
Otolemur garnettii ENSOGAG00000003701 ortholog_one2one 1 retrogene
retro_ogar_2375,
Pongo abelii ENSPPYG00000009710 ortholog_one2one 2 retrogenes
retro_pabe_1167, retro_pabe_1214,
Pan troglodytes ENSPTRG00000010668 ortholog_one2one 1 retrogene
retro_ptro_966,
Rattus norvegicus ENSRNOG00000039417 ortholog_one2one 1 retrogene
retro_rnor_1511,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1409 88.35 100.00
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Download FASTA sequences of all ENSG00000130311 retrocopies