Parental gene:

DDA1, ENSCPOG00000006944

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_86:6174300..6175895(+)


>ENSCPOG00000006944
CAGGCAGACTTTTTGAAAGGATTGCCCGTCTACAACAAGAGCAACTTTAGTCGCTTCCATGCTGACTCTGTGTGCAAGGC
TTCGAACCGACGCCCCTCCGTCTACCTGCCCACCCGAGAGTACCCGTCAGAACAGATCATTGTGACAGAAAAAACAAACA
TCCTCCTACGGTACCTACATCAGCAATGGGACAAAAAGAATGCTGCCAAAAAGAGGGACCAGGAGCAGGTGGAGCTGGAG
GGTGAGAGCTCGGCGCCACCCCGCAAGGTGGCGCGGACGGACAGCCCCGACATGCATGAGGACACCTAG

Library Parental gene expression (RPM)
SRP017611_brain 17 .14 RPM
SRP017611_kidney 10 .15 RPM
SRP017611_liver 5 .57 RPM
SRP040447_lung 20 .88 RPM
SRP040447_skeletal_muscle 9 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017068 ortholog_one2many 3 retrogenes
retro_btau_1152, retro_btau_536, retro_btau_74,
Canis familiaris ENSCAFG00000031251 ortholog_one2one 3 retrogenes
retro_cfam_1089, retro_cfam_2033, retro_cfam_475,
Felis catus ENSFCAG00000001001 ortholog_one2one 1 retrogene
retro_fcat_487,
Homo sapiens ENSG00000130311 ortholog_one2one 1 retrogene
retro_hsap_1409,
Gorilla gorilla ENSGGOG00000005802 ortholog_one2one 1 retrogene
retro_ggor_1093,
Microcebus murinus ENSMICG00000001763 ortholog_one2one 1 retrogene
retro_mmur_1162,
Myotis lucifugus ENSMLUG00000003990 ortholog_one2one 1 retrogene
retro_mluc_1014,
Macaca mulatta ENSMMUG00000016231 ortholog_one2one 1 retrogene
retro_mmul_2248,
Nomascus leucogenys ENSNLEG00000005738 ortholog_one2one 2 retrogenes
retro_nleu_1427, retro_nleu_1428,
Otolemur garnettii ENSOGAG00000003701 ortholog_one2one 1 retrogene
retro_ogar_2375,
Pongo abelii ENSPPYG00000009710 ortholog_one2one 2 retrogenes
retro_pabe_1167, retro_pabe_1214,
Pan troglodytes ENSPTRG00000010668 ortholog_one2one 1 retrogene
retro_ptro_966,
Rattus norvegicus ENSRNOG00000039417 ortholog_one2one 1 retrogene
retro_rnor_1511,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_435 72.28 98.04
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Download FASTA sequences of all ENSCPOG00000006944 retrocopies