Parental gene: | DDA1, ENSBTAG00000017068 |
| Aliases: | DDA1, PCIA1 |
| Description: | DET1- and DDB1-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q5E9A9] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 7:5729333..5739114(-) |
>ENSBTAG00000017068
ATGGCAGATTTTCTGAAAGGACTGCCTGTCTACAACAAAAGCAATTTTAGTAGATTTCATGCCGACTCTGTGTGCAAAGC
CTCGAACCGACGTCCCTCAGTCTACCTGCCCACTAGGGAGTACCCGTCTGAACAGATCATCGTGACAGAGAAAACAAACA
TTCTTTTGCGCTACCTACATCAGCAATGGGACAAAAAGAATGCCGCCAAGAAGAGAGACCAGGAGCAAGTGGAGCTAGAG
GGCGAGAGCTCGGCGCCGCCCCGCAAGGTTGCGCGGACCGACAGCCCGGACATGCACGAGGACACTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| ERP005899_liver | 1 .15 RPM |
| ERP005899_muscle | 8 .24 RPM |
| SRP017611_brain | 15 .58 RPM |
| SRP017611_kidney | 8 .59 RPM |
| SRP017611_liver | 4 .76 RPM |
| SRP030211_testis | 35 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000031251 | ortholog_one2many | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000006944 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000001001 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000130311 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005802 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000001763 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000003990 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016231 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005738 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003701 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000009710 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000010668 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000039417 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_74 | 74.23 | 95.10 | Please wait, loading  |
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| 2. | retro_btau_536 | 83.05 | 57.84 | Please wait, loading |
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| 3. | retro_btau_1152 | 98.88 | 87.25 | Please wait, loading |
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Download FASTA sequences of all ENSBTAG00000017068 retrocopies