Parental gene:

NDUFB4, ENSG00000065518

Aliases:NDUFB4, B15, CI-B15
Description:NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa [Source:HGNC Symbol;Acc:7699]
Organism:Human (Homo sapiens)
Coordinates:3:120315155..120321347(+)


>ENSG00000065518
ATGTCGTTCCCAAAGTATAAGCCGTCGAGCCTGCGCACTCTGCCTGAGACCCTCGACCCAGCCGAATACAACATATCTCC
GGAAACCCGGCGGGCGCAAGCCGAGCGGTTGGCCATAAGAGCCCAGCTGAAACGAGAGTACCTGCTTCAGTACAACGATC
CCAACCGCCGAGGGCTCATCGAAAATCCTGCCTTGCTTCGTTGGGCCTATGCAAGAACAATAAATGTCTATCCTAATTTC
AGACCCACTCCTAAAAACTCACTCATGGGAGCTCTGTGTGGATTTGGGCCCCTCATCTTCATTTATTATATTATCAAAAC
TGAGAGGGATAGGAAAGAAAAACTTATCCAGGAAGGAAAATTGGATCGAACATTTCACCTCTCATATTAA

Library Parental gene expression (RPM)
bodymap2_adipose 54 .15 RPM
bodymap2_adrenal 50 .68 RPM
bodymap2_brain 41 .42 RPM
bodymap2_breast 44 .53 RPM
bodymap2_colon 57 .85 RPM
bodymap2_heart 168 .03 RPM
bodymap2_kidney 68 .10 RPM
bodymap2_liver 58 .39 RPM
bodymap2_lung 56 .91 RPM
bodymap2_lymph_node 60 .01 RPM
bodymap2_ovary 42 .25 RPM
bodymap2_prostate 80 .73 RPM
bodymap2_skeletal_muscle 125 .75 RPM
bodymap2_testis 53 .13 RPM
bodymap2_thyroid 48 .90 RPM
bodymap2_white_blood_cells 39 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000011462 ortholog_one2one 1 retrogene
retro_acar_74,
Ailuropoda melanoleuca ENSAMEG00000004761 ortholog_one2one 2 retrogenes
retro_amel_1289, retro_amel_1491,
Bos taurus ENSBTAG00000015892 ortholog_one2many 2 retrogenes
retro_btau_184, retro_btau_995,
Choloepus hoffmanni ENSCHOG00000000006 ortholog_one2one 2 retrogenes
retro_chof_188, retro_chof_777,
Callithrix jacchus ENSCJAG00000008695 ortholog_one2many 4 retrogenes
retro_cjac_1290, retro_cjac_2140, retro_cjac_302, retro_cjac_3251,
Danio rerio ENSDARG00000019332 ortholog_one2one 1 retrogene
retro_drer_32,
Dasypus novemcinctus ENSDNOG00000024123 ortholog_one2one 4 retrogenes
retro_dnov_1290, retro_dnov_1833, retro_dnov_394, retro_dnov_486,
Gorilla gorilla ENSGGOG00000013923 ortholog_one2one 2 retrogenes
retro_ggor_1853, retro_ggor_2265,
Loxodonta africana ENSLAFG00000021459 ortholog_one2one 1 retrogene
retro_lafr_1078,
Microcebus murinus ENSMICG00000005226 ortholog_one2one 4 retrogenes
retro_mmur_1409, retro_mmur_1415, retro_mmur_882, retro_mmur_915,
Myotis lucifugus ENSMLUG00000027951 ortholog_one2one 3 retrogenes
retro_mluc_1433, retro_mluc_2010, retro_mluc_489,
Macaca mulatta ENSMMUG00000001592 ortholog_one2one 4 retrogenes
retro_mmul_1217, retro_mmul_1514, retro_mmul_1979, retro_mmul_356,
Monodelphis domestica ENSMODG00000018229 ortholog_one2one 1 retrogene
retro_mdom_1658,
Mustela putorius furo ENSMPUG00000008272 ortholog_one2many 1 retrogene
retro_mputfur_81,
Mus musculus ENSMUSG00000022820 ortholog_one2one 4 retrogenes
retro_mmus_1075, retro_mmus_1077, retro_mmus_1405, retro_mmus_1820,
Nomascus leucogenys ENSNLEG00000007706 ortholog_one2one 4 retrogenes
retro_nleu_134, retro_nleu_2889, retro_nleu_2989, retro_nleu_762,
Otolemur garnettii ENSOGAG00000005956 ortholog_one2one 5 retrogenes
retro_ogar_1454, retro_ogar_1917, retro_ogar_1922, retro_ogar_2874, retro_ogar_3091,
Pongo abelii ENSPPYG00000013503 ortholog_one2one 3 retrogenes
retro_pabe_1526, retro_pabe_2500, retro_pabe_2565,
Pan troglodytes ENSPTRG00000015270 ortholog_one2one 6 retrogenes
retro_ptro_1226, retro_ptro_1582, retro_ptro_1791, retro_ptro_1980, retro_ptro_2099, retro_ptro_947,
Rattus norvegicus ENSRNOG00000002721 ortholog_one2many 3 retrogenes
retro_rnor_275, retro_rnor_291, retro_rnor_99,
Sorex araneus ENSSARG00000012482 ortholog_one2one 1 retrogene
retro_sara_600,
Ictidomys tridecemlineatus ENSSTOG00000020092 ortholog_one2many 3 retrogenes
retro_itri_3, retro_itri_666, retro_itri_786,
Tarsius syrichta ENSTSYG00000006456 ortholog_one2one 7 retrogenes
retro_tsyr_1062, retro_tsyr_109, retro_tsyr_1617, retro_tsyr_1635, retro_tsyr_410, retro_tsyr_627, retro_tsyr_736,
Tursiops truncatus ENSTTRG00000016658 ortholog_one2one 1 retrogene
retro_ttru_625,
Vicugna pacos ENSVPAG00000003774 ortholog_one2one 1 retrogene
retro_vpac_251,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1378 57.83 63.57
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2. retro_hsap_1729 76.74 100.00
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3. retro_hsap_2238 75.56 68.99
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4. retro_hsap_2656 70.54 100.00
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5. retro_hsap_2926 89.92 100.00
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6. retro_hsap_3103 70.97 96.12
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Download FASTA sequences of all ENSG00000065518 retrocopies