Parental gene:

NONO, ENSFCAG00000014807

Aliases:None
Description:non-POU domain containing, octamer-binding [Source:HGNC Symbol;Acc:7871]
Organism:Cat (Felis catus)
Coordinates:X:59041428..59055406(+)


>ENSFCAG00000014807
CGTCTCGTTTCCGGCGGTCGCGCGCTCTTTTCTCGGGACGGTAGAGGCCGTGTAGCGTCGCCGTTACTCTGGAATAGGGA
TAGTGGTTCCCAGCAGGAACAAATGCTTGCTGTGAGGAAACAGTGCTGCACTATGCGGACACTAAAAGGTGCAAAAATGC
AGAGCAATAAAACCTTTAACTTGGAGAAGCAAAACCATACTCCAAGGAAGCATCATCAGCATCACCACCAGCAGCACCAC
CAACAGCAACAGCAACAGCCACCACCGCCACCAATACCTGCAAATGGGCAACAAGCCAGCAGCCAAAATGAAGGCTTGAC
TATTGACCTGAAGAATTTTAGGAAACCAGGAGAGAAGACCTTCACCCAACGTAGCCGGCTTTTTGTGGGCAATCTTCCTC
CTGACATCACTGAGGAGGAGATGAGGAAACTATTTGAGAAATACGGGAAGGCAGGCGAAGTCTTCATTCATAAGGATAAG
GGCTTTGGCTTTATCCGCTTGGAAACACGAACCCTAGCAGAGATTGCCAAAGTAGAGCTGGACAACATGCCACTTCGTGG
AAAGCAGCTGCGTGTGCGCTTTGCCTGCCATAGTGCATCGCTTACGGTCCGAAACCTTCCTCAGTATGTTTCTAACGAAC
TGCTGGAGGAAGCTTTTTCTGTGTTTGGCCAAGTGGAAAGGGCTGTAGTCATCGTGGATGATAGAGGAAGGCCCTCAGGA
AAAGGCATTGTTGAATTCTCAGGGAAGCCAGCTGCTCGGAAAGCTCTGGACAGGTGCAGTGAAGGCTCCTTCCTGTTAAC
CACATTTCCTCGGCCTGTGACTGTGGAGCCCATGGACCAGTTGGATGATGAAGAGGGACTTCCAGAGAAGCTGGTTATAA
AGAACCAGCAATTTCATAAGGAGCGAGAACAGCCACCCAGATTTGCACAGCCTGGCTCCTTTGAGTATGAGTATGCCATG
CGCTGGAAGGCACTCATTGAGATGGAGAAGCAGCAGCAGGACCAAGTGGACCGCAACATCAAGGAAGCTCGTGAGAAGCT
GGAGATGGAGATGGAGGCTGCTCGCCATGAGCACCAAGTCATGTTAATGAGACAGGATTTGATGAGGCGTCAAGAAGAAC
TCCGGAGGATGGAAGAGCTGCACAACCAAGAGGTGCAAAAACGAAAGCAACTGGAGCTCAGGCAGGAGGAAGAGCGCAGG
CGCCGTGAAGAAGAGATGCGGCGGCAGCAGGAAGAAATGATGCGGCGACAGCAGGAAGGATTCAAGGGAACATTCCCTGA
TGCGAGAGAACAGGAGATACGGATGGGCCAGATGGCCATGGGAGGTGCTATGGGCATAAACAACAGAGGCGCCATGCCCC
CTGCTCCAGTGCCAGCTGGTACCCCAGCTCCTCCAGGACCTGCCACTATGATGCCAGATGGAACCTTGGGATTGAAGACC
CCACCAACAACTGAACGCTTTGGCCAGGCTGCTACCATGGAAGGAATTGGGGCCATTGGTGGAACCCCTCCTGCGTTCAA
CCGTGCAGCTCCTGGAGCTGAATTTGCTCCAAACAAACGTCGCCGATACTAA

Library Parental gene expression (RPM)
SRP017611_brain 44 .65 RPM
SRP017611_kidney 85 .13 RPM
SRP017611_liver 57 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016057 ortholog_one2one 2 retrogenes
retro_amel_1438, retro_amel_795,
Bos taurus ENSBTAG00000012152 ortholog_one2one 2 retrogenes
retro_btau_1027, retro_btau_313,
Canis familiaris ENSCAFG00000017071 ortholog_one2many 1 retrogene
retro_cfam_98,
Callithrix jacchus ENSCJAG00000036744 ortholog_one2many 1 retrogene
retro_cjac_3990,
Equus caballus ENSECAG00000008502 ortholog_one2one 2 retrogenes
retro_ecab_357, retro_ecab_427,
Felis catus ENSFCAG00000031287 within_species_paralog 1 retrogene
retro_fcat_1989,
Homo sapiens ENSG00000147140 ortholog_one2one 1 retrogene
retro_hsap_1699,
Gorilla gorilla ENSGGOG00000006194 ortholog_one2one 1 retrogene
retro_ggor_1273,
Microcebus murinus ENSMICG00000000232 ortholog_one2one 1 retrogene
retro_mmur_569,
Myotis lucifugus ENSMLUG00000002489 ortholog_one2one 1 retrogene
retro_mluc_622,
Mustela putorius furo ENSMPUG00000004937 ortholog_one2one 1 retrogene
retro_mputfur_937,
Mus musculus ENSMUSG00000031311 ortholog_one2one 2 retrogenes
retro_mmus_3652, retro_mmus_632,
Nomascus leucogenys ENSNLEG00000001278 ortholog_one2one 1 retrogene
retro_nleu_1344,
Oryctolagus cuniculus ENSOCUG00000021848 ortholog_one2many 2 retrogenes
retro_ocun_1317, retro_ocun_1804,
Otolemur garnettii ENSOGAG00000004834 ortholog_one2one 3 retrogenes
retro_ogar_1525, retro_ogar_546, retro_ogar_593,
Pongo abelii ENSPPYG00000020451 ortholog_one2one 1 retrogene
retro_pabe_1398,
Pan troglodytes ENSPTRG00000022010 ortholog_one2one 1 retrogene
retro_ptro_1150,
Pteropus vampyrus ENSPVAG00000016503 ortholog_one2one 1 retrogene
retro_pvam_444,
Rattus norvegicus ENSRNOG00000003689 ortholog_one2one 2 retrogenes
retro_rnor_1178, retro_rnor_1503,
Sorex araneus ENSSARG00000007959 ortholog_one2one 2 retrogenes
retro_sara_661, retro_sara_663,
Drosophila melanogaster FBgn0004227 ortholog_many2many 1 retrogene
retro_dmel_11,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_147 91.00 90.82
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2. retro_fcat_1219 87.71 90.82
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Download FASTA sequences of all ENSFCAG00000014807 retrocopies