Parental gene:

RBMX, ENSFCAG00000004779

Aliases:None
Description:RNA binding motif protein, X-linked [Source:HGNC Symbol;Acc:9910]
Organism:Cat (Felis catus)
Coordinates:X:111485138..111490054(-)


>ENSFCAG00000004779
ATGGTTGAAGCAGATCGCCCAGGAAAGCTTTTCATTGGTGGCCTCAATACAGAAACAAATGAAAAAGCCCTTGAAGCCGT
ATTTGGCAAATATGGACGAATAGTGGAAGTTCTGTTGATGAAAGATCGTGAGACCAACAAATCGAGAGGATTTGCTTTTG
TCACCTTTGAAAGCCCAGCAGATGCTAAGGATGCAGCCAGAGACATGAACGGAAAGTCCTTAGATGGAAAAGCCATCAAG
GTAGAACAAGCCACTAAACCGTCATTTGAAAGTGGCAGACGTGGACCACCTCCACCCCCAAGAAGCAGAGGCCCCCCAAG
AGGTCTTAGGGGCGGAAGAGGAGGAAGTGGAGGAACCAGGGGACCTCCCTCACGTGGAGGGCACATGGATGATGGTGGTT
ATTCCATGAATTTTAACATGAGTTCTTCCAGGGGACCACTTCCAGTAAAAAGAGGACCTCCACCAAGAAGTGGCGGCCCT
CCTCCTAAAAGATCAGCCCCTTCAGGACCAGTTCGCAGTAGCAGTGGAATGGGAGGAAGAGCTCCTGTGTCACGTGGAAG
AGACAGTTATGGAGGCCCACCTCGAAGGGAACCCCTGCCCTCTCGTAGAGATGTTTATTTGTCCCCAAGAGATGACGGAT
ATTCTACTAAAGACAGCTATTCAAGCAGAGATTACCCAAGTTCTCGTGATACAAGAGATTATGCACCACCCCCGAGAGAT
TATACTTACCGTGACTATGGTCATTCCAGTTCACGTGATGACTACCCATCAAGAGGCTATAGTGATAGAGATGGCTATGG
TCGTGATCGTGACTATTCAGATCATCCGAGTGGAGGCTCCTACAGAGATTCATATGAGAGTTATGGTAACTCACGTAGTG
CTCCACCTACACGAGGGCCCCCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTACAGCAGCTCACGTGACGGATAT
GGTGGAAGTCGAGACAGTTACTCAAGCAGCCGAAGTGATCTCTACTCAAGTGGTCGTGATCGGGTTGGCAGACAAGAAAG
AGGGCTTCCCCCTTCTATGGAAAGGGGGTACCCTCCTCCACGTGATTCCTACAGCAGTTCAAGCCGCGGAGCACCAAGAG
GTGGTGGCCGTGGAGGAAGCCGATCTGATAGAGGGGGAGGCAGAAGCAGATATTAA

Library Parental gene expression (RPM)
SRP017611_brain 39 .94 RPM
SRP017611_kidney 44 .11 RPM
SRP017611_liver 24 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013308 possible_ortholog 1 retrogene
retro_btau_36,
Canis familiaris ENSCAFG00000018962 ortholog_one2one 4 retrogenes
retro_cfam_1106, retro_cfam_1244, retro_cfam_1649, retro_cfam_1914,
Cavia porcellus ENSCPOG00000012164 possible_ortholog 1 retrogene
retro_cpor_778,
Dasypus novemcinctus ENSDNOG00000017199 possible_ortholog 3 retrogenes
retro_dnov_1436, retro_dnov_2205, retro_dnov_696,
Dipodomys ordii ENSDORG00000015481 possible_ortholog 1 retrogene
retro_dord_793,
Echinops telfairi ENSETEG00000013178 possible_ortholog 1 retrogene
retro_etel_1952,
Homo sapiens ENSG00000147274 ortholog_one2one 7 retrogenes
retro_hsap_23, retro_hsap_3074, retro_hsap_3587, retro_hsap_4144, retro_hsap_4846, retro_hsap_800, retro_hsap_91,
Gorilla gorilla ENSGGOG00000006944 possible_ortholog 1 retrogene
retro_ggor_657,
Loxodonta africana ENSLAFG00000005568 possible_ortholog 3 retrogenes
retro_lafr_1188, retro_lafr_276, retro_lafr_35,
Microcebus murinus ENSMICG00000006856 ortholog_one2one 2 retrogenes
retro_mmur_1252, retro_mmur_661,
Myotis lucifugus ENSMLUG00000013209 possible_ortholog 5 retrogenes
retro_mluc_1630, retro_mluc_1746, retro_mluc_203, retro_mluc_2180, retro_mluc_80,
Mustela putorius furo ENSMPUG00000001855 ortholog_one2one 2 retrogenes
retro_mputfur_1539, retro_mputfur_956,
Mus musculus ENSMUSG00000031134 possible_ortholog 2 retrogenes
retro_mmus_170, retro_mmus_187,
Oryctolagus cuniculus ENSOCUG00000007220 possible_ortholog 1 retrogene
retro_ocun_3,
Otolemur garnettii ENSOGAG00000007839 possible_ortholog 5 retrogenes
retro_ogar_1057, retro_ogar_137, retro_ogar_1586, retro_ogar_2445, retro_ogar_2584,
Pongo abelii ENSPPYG00000020771 ortholog_one2one 3 retrogenes
retro_pabe_2548, retro_pabe_303, retro_pabe_766,
Rattus norvegicus ENSRNOG00000000866 ortholog_one2one 1 retrogene
retro_rnor_268,
Sorex araneus ENSSARG00000000397 possible_ortholog 1 retrogene
retro_sara_169,
Ictidomys tridecemlineatus ENSSTOG00000006211 ortholog_one2one 2 retrogenes
retro_itri_1205, retro_itri_1346,
Tarsius syrichta ENSTSYG00000009555 possible_ortholog 1 retrogene
retro_tsyr_15,
Tursiops truncatus ENSTTRG00000007322 ortholog_one2one 1 retrogene
retro_ttru_1450,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1903 74.45 80.56
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Download FASTA sequences of all ENSFCAG00000004779 retrocopies