Parental gene:

SRP14, ENSEEUG00000012759

Aliases:None
Description:signal recognition particle 14kDa (homologous Alu RNA binding protein) [Source:HGNC Symbol;Acc:11299]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_3398:181084..187955(-)


>ENSEEUG00000012759
ATGGTGCTGCTGGAGAGCGAGCAGTTCCTGACGGAGCTGACCAGGCTTTTCCAGAAGTGCCGGCTGTCGGGCAGCGTGTT
CATCACCCTGAAGAAGTATGACGGTCGCACCAAGCCCATCCCCAGGAAGGGCTCCGTGGAGGGCTTCGAGCCCGCGGACA
AGTGCCTGCTGCGAGCCACTGACGGCAAGAAGAAGATCAGCACGGTGGTGAGTTCCAAAGAAGTGAATAAGTTTCAGATG
GCTTATTCAAACCTGCTGAGAGCCAACATGGATGGTCTGAAGAAGAGGGACAAAAAGAGCAAGAGTAAGAAGAGCAAAGC
AGCACAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 22 .56 RPM
SRP017611_kidney 17 .82 RPM
SRP017611_liver 10 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017231 ortholog_one2one 1 retrogene
retro_amel_1566,
Canis familiaris ENSCAFG00000029889 possible_ortholog 2 retrogenes
retro_cfam_210, retro_cfam_40,
Callithrix jacchus ENSCJAG00000020912 possible_ortholog 3 retrogenes
retro_cjac_1642, retro_cjac_171, retro_cjac_3057,
Echinops telfairi ENSETEG00000011870 ortholog_one2one 1 retrogene
retro_etel_1094,
Gorilla gorilla ENSGGOG00000009921 possible_ortholog 1 retrogene
retro_ggor_665,
Myotis lucifugus ENSMLUG00000010531 ortholog_one2one 5 retrogenes
retro_mluc_1489, retro_mluc_2284, retro_mluc_2545, retro_mluc_375, retro_mluc_384,
Macaca mulatta ENSMMUG00000016061 possible_ortholog 4 retrogenes
retro_mmul_1228, retro_mmul_1740, retro_mmul_573, retro_mmul_780,
Monodelphis domestica ENSMODG00000029204 ortholog_one2one 1 retrogene
retro_mdom_1806,
Mustela putorius furo ENSMPUG00000008324 possible_ortholog 1 retrogene
retro_mputfur_376,
Otolemur garnettii ENSOGAG00000029070 possible_ortholog 2 retrogenes
retro_ogar_2839, retro_ogar_40,
Ochotona princeps ENSOPRG00000008599 ortholog_one2one 1 retrogene
retro_opri_619,
Pongo abelii ENSPPYG00000006342 possible_ortholog 3 retrogenes
retro_pabe_1534, retro_pabe_262, retro_pabe_811,
Rattus norvegicus ENSRNOG00000007512 ortholog_one2one 1 retrogene
retro_rnor_2702,
Vicugna pacos ENSVPAG00000010282 possible_ortholog 1 retrogene
retro_vpac_20,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_357 97.25 100.00
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Download FASTA sequences of all ENSEEUG00000012759 retrocopies