Parental gene: | IGBP1, ENSDNOG00000014731 |
| Aliases: | None |
| Description: | immunoglobulin (CD79A) binding protein 1 [Source:HGNC Symbol;Acc:5461] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_914:36815..97876(+) |
>ENSDNOG00000014731
ATGGCAGCAGCCGAAGACGAGTTAATATTGCCGCGGCTCCCCGAGCTATTCGAAACCAGCAAGCAGCTTCTGGACGAAGT
GGAAGTAGCGACTGAACCCACCGGATCCCGGATAGTCCAGGATAAGGTGTTTAAGGGACTGGCCCTCCTTGAAAAGGCTG
CCGAAATGATTTCGCAGCTCGACTTGTTCAGCCGAAATGAAGACTTGGAAGAGATTGCTTCCACCGACGTGAAGTACTTG
ATGGTGCCGGCGTTTCAAGGAGCTCTCACCATGAAACAAGTCAACCCCAGCAAGCGGCTGGATCATTTGCAGCGGGCTCG
AGAACACTTTCTAAACTACTTAACTCAGTGTCATTACTATCATGTGGCTGAATTTGAGATTCCCAAAACCAAGAACAACT
CGACTGAAAATAACACTGCTAGCTCCTCCATGGCCTATCCCAGCCTTGTTGCTATGGCATCCCAAAGACAGGCTAAAGTA
GAGAGATACAAGCAGAAGAAGGAGTTGGAGCATAGATTATCTGCACTGAAATCTTCTGTGGAAAATGGTCAAGCAGATGA
TGAGCGTGTTCGTGAATATTATCTCCTTCACCTTCAGAGGTGGATTGGTGTCAGCTTGGAAGAGATTGAGAGTATTGATC
AGGAAATGAAGATCCTGAGAGAAAAAGATTTCTCAAAAGAGGCATCAACTTCTCGCTCATCTCGTCAGGACAGACCTCCA
GTGAAACCCTTCATTCTCACTCGGGATGTGGCCCAAGCCAAGGTGTTTGGAGCTGGTTATCCAAGTCTGGCAACGATGAC
AGTGGATGACTGGTATGATCAGCATCGGAAATATGGTGCATTACCAGATCAAGGAATAGCCAAGGCAACACCAGCAGAGT
TCAAAAAAGCAGCTCAACAACAGGAAGATCAGGAACAAAAGGAAGAAGATGCTGATGAGAAAACACTACATAGAGCTCGG
GAGTGGGATGACTGGAAGGATACCCATCCTAGGGGTTATGGAAACCGACAGAACATGGGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 19 .84 RPM |
| SRP012922_cerebellum | 19 .25 RPM |
| SRP012922_heart | 6 .73 RPM |
| SRP012922_kidney | 18 .34 RPM |
| SRP012922_liver | 11 .46 RPM |
| SRP012922_lung | 14 .36 RPM |
| SRP012922_quadricep_muscle | 19 .56 RPM |
| SRP012922_spleen | 13 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007797 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000013654 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000012525 | ortholog_one2many | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000010797 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000003397 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000029688 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000089289 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027795 | ortholog_one2many | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000004179 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000013929 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000031221 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000747 | ortholog_one2one | 5 retrogenes | |
| Otolemur garnettii | ENSOGAG00000011797 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000020435 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000021990 | ortholog_one2one | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000005483 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000026267 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000006214 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_678 | 63.10 | 83.82 | Please wait, loading  |
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| 2. | retro_dnov_1160 | 81.13 | 92.65 | Please wait, loading |
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| 3. | retro_dnov_2029 | 72.28 | 83.24 | Please wait, loading |
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| 4. | retro_dnov_2340 | 90.62 | 100.00 | Please wait, loading |
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| 5. | retro_dnov_2380 | 67.72 | 72.94 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000014731 retrocopies