Parental gene: | LIN28A, ENSDNOG00000010710 |
| Aliases: | None |
| Description: | lin-28 homolog A (C. elegans) [Source:HGNC Symbol;Acc:15986] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_2922:6770..24407(+) |
>ENSDNOG00000010710
GTGGACTCTGTTTCCAACCAACAGTTTAAAGGTGGCTGCGCCAAGGCGGCGGAGGAGGCGCCGGAGAACGCGGCCCGGGA
GGGAGAGGAGCCGCAGCTGCTGCACGGTGCCGGCATCTGTAAGTGGTTCAACGTGCGCATGGGGTTCGGCTTCCTGTCCA
TGACCGCCCGCGCCGGGGTCGCGCTCGACCCCCCAGTGGACGTCTTTGTGCATCAGAGTAAGCTGCACATGGAGGGCTTC
CGGAGCCTGAAGGAGGGCGAGGCAGTCGAGTTCACCTTTAAGAAGTCTGCCAAGGGCCTGGAATCTATCCGCGTCACCGG
ACCTGGTGGGGTGTTCTGTATTGGGAGTGAGAGGCGGCCAAAGGGGAAGAATATGCAGAAGCGTAGATCAAAAGGAGACA
GGTGCTACAACTGTGGAGGTCTAGACCATCATGCCAAGGAATGCAAGCTGCCACCCCAGCCTAAGAAGTGCCACTTCTGC
CAGAGCATCAGCCATATGGTGGCCTCATGTCCACTGAAAGCTCAGCAGGCCCCAAGTTCCCAGGGAAAGCCCTCCTACTT
TCGGGAGGAAGAAGAAGAGATCCACAGCCCTGCCCTGCTCCCAGAGGCCCAGAATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 0 .00 RPM |
| SRP012922_cerebellum | 0 .14 RPM |
| SRP012922_heart | 0 .00 RPM |
| SRP012922_kidney | 0 .00 RPM |
| SRP012922_liver | 0 .00 RPM |
| SRP012922_lung | 0 .15 RPM |
| SRP012922_quadricep_muscle | 0 .00 RPM |
| SRP012922_spleen | 0 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010582 | ortholog_one2many | 2 retrogenes | |
| Bos taurus | ENSBTAG00000040497 | ortholog_one2many | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000012488 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000009796 | ortholog_one2many | 5 retrogenes | |
| Cavia porcellus | ENSCPOG00000019646 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000020267 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000131914 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000024918 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000010158 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009294 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000000299 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003971 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001684 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000000384 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000017267 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000038409 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000003557 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004329 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000005678 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_102 | 75.98 | 98.05 | Please wait, loading  |
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| 2. | retro_dnov_690 | 74.00 | 95.61 | Please wait, loading |
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| 3. | retro_dnov_853 | 70.95 | 100.00 | Please wait, loading |
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| 4. | retro_dnov_1112 | 61.50 | 94.63 | Please wait, loading |
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| 5. | retro_dnov_2300 | 71.55 | 56.10 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000010710 retrocopies