Parental gene: | SUB1, ENSDNOG00000007611 |
| Aliases: | None |
| Description: | SUB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:19985] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_4248:471289..515511(+) |
>ENSDNOG00000007611
ATGCCTAAATCAAAGGAACTTGTTTCTTCAAGCTCATCTGGCAGTGATTCTGATAGTGAAGTTGACAAAAAGCTAAAGAG
GAAAAAGCAAATTCCTCCAGAAAAACCTGTAAAGAAGCAAAAGACTGGTGAAACCTCCAGAGCCCTGTCATCTTCCAAGC
AGAGCAGCAGCAGCAGAGATGATAACATGTTTCAGATTGGGAAAATGAGGTACGTCAGTGTTAGGGACTTTAAAGGAAAA
GTCCTAATTGATATTAGAGAATATTGGATGGATCCAGAAGGTGAAATGAAACCAGGAAGGAAAGGTATTTCTTTAAATCC
TGAGCAATGGAGCCAACTGAAGGAACAGATTTCTGACATTGATGATGCAGTAAGAAAACTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 82 .65 RPM |
| SRP012922_cerebellum | 62 .82 RPM |
| SRP012922_heart | 75 .18 RPM |
| SRP012922_kidney | 115 .27 RPM |
| SRP012922_liver | 51 .24 RPM |
| SRP012922_lung | 114 .70 RPM |
| SRP012922_quadricep_muscle | 49 .85 RPM |
| SRP012922_spleen | 203 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000018879 | possible_ortholog | 5 retrogenes | |
| Callithrix jacchus | ENSCJAG00000018718 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000005584 | ortholog_one2one | 4 retrogenes | |
| Dipodomys ordii | ENSDORG00000013916 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000113387 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027033 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000011006 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000007770 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000014535 | ortholog_one2many | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000013685 | ortholog_one2many | 6 retrogenes | |
| Macaca mulatta | ENSMMUG00000011470 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000020410 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000015185 | possible_ortholog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000022205 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000006262 | possible_ortholog | 5 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009012 | ortholog_one2many | 6 retrogenes | |
| Pongo abelii | ENSPPYG00000015379 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000050563 | ortholog_one2one | 12 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000014986 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000019364 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000014069 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_161 | 73.28 | 100.00 | Please wait, loading  |
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| 2. | retro_dnov_400 | 83.96 | 82.68 | Please wait, loading |
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| 3. | retro_dnov_1230 | 52.63 | 88.98 | Please wait, loading |
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| 4. | retro_dnov_1822 | 97.37 | 59.84 | Please wait, loading |
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| 5. | retro_dnov_2156 | 70.11 | 67.72 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000007611 retrocopies