Parental gene:

MYCBP, ENSCPOG00000020447

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_143:996187..1002373(-)


>ENSCPOG00000020447
ATGAGCAGTGCTGCTCCGAGCCCGCCTGCCACGGTCTCCGGCGCCAGCTACGCCGTTGCCCCAGTCACTATGGCCCATTA
CAAAGCCGCTGACTCGAAGCGCGAGCAGTTCCGGAGATACTTGGAGAAGTCTGGGGTGCTGGACACGTTGACCAAGGTGT
TGGTAGCCTTATATGAAGAACCAGAGAAACCTAATAGTGCATTGGATTTCTTAAAGCATCACTTAGGAGCTGCTACCCCA
GAAAATCCAGAAATCGAGCTGCTTCGCCTAGAATTGGCAGAAATGAAAGAGAAATATGAAGCTACTATAGAAGAAAATAA
AAAACTGAAAGCCAAGCTTGCTCAGTATGAACCACCTCAGGACGAGAAGCGTGCTGAA

Library Parental gene expression (RPM)
SRP017611_brain 1 .61 RPM
SRP017611_kidney 10 .47 RPM
SRP017611_liver 14 .36 RPM
SRP040447_lung 5 .27 RPM
SRP040447_skeletal_muscle 2 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000030622 ortholog_one2one 1 retrogene
retro_cfam_1618,
Choloepus hoffmanni ENSCHOG00000013136 ortholog_one2one 3 retrogenes
retro_chof_1349, retro_chof_151, retro_chof_610,
Callithrix jacchus ENSCJAG00000036558 ortholog_one2many 1 retrogene
retro_cjac_5,
Homo sapiens ENSG00000214114 ortholog_one2one 2 retrogenes
retro_hsap_1649, retro_hsap_2251,
Gorilla gorilla ENSGGOG00000005810 ortholog_one2one 2 retrogenes
retro_ggor_1245, retro_ggor_1678,
Loxodonta africana ENSLAFG00000020514 ortholog_one2one 2 retrogenes
retro_lafr_1071, retro_lafr_903,
Macropus eugenii ENSMEUG00000000315 ortholog_one2one 1 retrogene
retro_meug_247,
Mus musculus ENSMUSG00000028647 ortholog_one2one 1 retrogene
retro_mmus_1626,
Nomascus leucogenys ENSNLEG00000011814 ortholog_one2one 2 retrogenes
retro_nleu_1319, retro_nleu_2489,
Oryctolagus cuniculus ENSOCUG00000022203 ortholog_one2one 2 retrogenes
retro_ocun_907, retro_ocun_979,
Otolemur garnettii ENSOGAG00000024435 ortholog_one2one 3 retrogenes
retro_ogar_1283, retro_ogar_1553, retro_ogar_1880,
Pongo abelii ENSPPYG00000001515 ortholog_one2one 1 retrogene
retro_pabe_1400,
Pan troglodytes ENSPTRG00000000565 ortholog_one2one 2 retrogenes
retro_ptro_1120, retro_ptro_1594,
Rattus norvegicus ENSRNOG00000017166 ortholog_one2one 2 retrogenes
retro_rnor_573, retro_rnor_779,
Sus scrofa ENSSSCG00000003649 ortholog_one2one 2 retrogenes
retro_sscr_1176, retro_sscr_1217,
Ictidomys tridecemlineatus ENSSTOG00000021547 ortholog_one2one 2 retrogenes
retro_itri_1518, retro_itri_252,
Tarsius syrichta ENSTSYG00000005690 ortholog_one2one 1 retrogene
retro_tsyr_172,
Tursiops truncatus ENSTTRG00000009583 ortholog_one2one 1 retrogene
retro_ttru_1872,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1195 76.47 66.67
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Download FASTA sequences of all ENSCPOG00000020447 retrocopies