Parental gene: | PPIH, ENSCPOG00000008214 |
| Aliases: | None |
| Description: | Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:H0VBU7] |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_133:1940199..1950555(+) |
>ENSCPOG00000008214
ATGGCGGTGGCAAATTCAAGCCCCGTAAACCCGGTGGTGTTCTTTGATGTCAGCATCGGTGGCCAGGAGGTTGGCCGCAT
GAAGATCGAGCTGTTTGCAGATGTTGTGCCCAAGACAGCCGAGAACTTCAGGCAGTTCTGCACTGGAGAATTCAGAAAAG
ATGGGGTTCCAATAGGCTATAAAGGAAGCACCTTCCACAGGGTCATAAAAGATTTCATGATTCAGGGTGGAGATTTTGTT
AATGGAGATGGTACTGGAGTTGCCAGTATTTACCGGGGCCCTTTTGCAGATGAAAATTTTAAACTCAGGCACTCAGCTCC
AGGCCTACTTTCCATGGCAAACAGCGGGCCCAGTACAAATGGCTGTCAGTTCTTTATCACCTGCTCAAAGTGCGACTGGC
TGGATGGGAAGCACGTAGTGTTTGGAAAAATCATTGATGGACTTCTAGTGATGAGAAAGATTGAGAATGTTCCTACAGGC
CCCAACAATAAGCCCAAACTGCCTGTGGTGATCTCACAGTGTGGGGAAATGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 9 .38 RPM |
| SRP017611_kidney | 11 .83 RPM |
| SRP017611_liver | 9 .66 RPM |
| SRP040447_lung | 11 .80 RPM |
| SRP040447_skeletal_muscle | 5 .51 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000000526 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000004590 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000003145 | ortholog_one2many | 5 retrogenes | |
| Dipodomys ordii | ENSDORG00000016152 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000171960 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000022507 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000001691 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000025400 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000013129 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000013966 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000012313 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000011453 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000011139 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001467 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000000614 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000005500 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000000115 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000003182 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_785 | 66.67 | 96.05 | Please wait, loading  |
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| 2. | retro_cpor_786 | 66.43 | 77.97 | Please wait, loading |
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| 3. | retro_cpor_794 | 76.84 | 52.54 | Please wait, loading |
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| 4. | retro_cpor_795 | 61.07 | 73.45 | Please wait, loading |
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| 5. | retro_cpor_796 | 67.61 | 98.87 | Please wait, loading |
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| 6. | retro_cpor_797 | 66.67 | 60.45 | Please wait, loading |
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| 7. | retro_cpor_798 | 72.03 | 79.10 | Please wait, loading |
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| 8. | retro_cpor_1511 | 75.28 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSCPOG00000008214 retrocopies