Parental gene:

EIF1AX, ENSCJAG00000005371

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:18489477..18497357(-)


>ENSCJAG00000005371
CTACCGAAACCATCAGGTAAAGGAGGTAAAAACAGACGTAGAGGTAAGAATGAGAATGAATCTGAAAAAAGAGAACTAGT
ATTCAAAGAAGATGGTCAGGAGTATGCTCAGGTGATCAAAATGTTGGGAAATGGACGGCTTGAAGCAATGTGTTTCGATG
GTGTAAAGAGGTTATGTCACATCAGAGGAAAACTGAGAAAAAAGGTTTGGATAAATACCTCCGACATAATATTGGTTGGT
CTCCGAGACTACCAGGATAACAAAGCGGATGTAATTTTAAAATACAATGCAGACGAAGCCAGAAGTCTGAAGGCATATGG
CGAGCTTCCAGAGCATGCTAAAATCAATGAAACGGATACATTTGGTCCGGGAGATGATGATGAAATTCAGTTCGATGACA
TTGGAGATGATGATGAAGATATTGACGACGTA

Library Parental gene expression (RPM)
SRP051959_colon 11 .67 RPM
SRP051959_heart 11 .26 RPM
SRP051959_kidney 13 .13 RPM
SRP051959_liver 14 .27 RPM
SRP051959_lung 10 .74 RPM
SRP051959_lymph_node 10 .43 RPM
SRP051959_skeletal_muscle 13 .61 RPM
SRP051959_spleen 11 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000012660 possible_ortholog 1 retrogene
retro_acar_151,
Ailuropoda melanoleuca ENSAMEG00000016604 ortholog_one2one 1 retrogene
retro_amel_1421,
Bos taurus ENSBTAG00000017633 possible_ortholog 3 retrogenes
retro_btau_1293, retro_btau_293, retro_btau_381,
Dipodomys ordii ENSDORG00000011536 possible_ortholog 1 retrogene
retro_dord_484,
Equus caballus ENSECAG00000006469 possible_ortholog 2 retrogenes
retro_ecab_464, retro_ecab_634,
Erinaceus europaeus ENSEEUG00000007518 possible_ortholog 3 retrogenes
retro_eeur_408, retro_eeur_567, retro_eeur_686,
Homo sapiens ENSG00000173674 possible_ortholog 2 retrogenes
retro_hsap_1431, retro_hsap_350,
Gorilla gorilla ENSGGOG00000012186 possible_ortholog 3 retrogenes
retro_ggor_1103, retro_ggor_363, retro_ggor_968,
Latimeria chalumnae ENSLACG00000015565 ortholog_one2one 1 retrogene
retro_lcha_65,
Macaca mulatta ENSMMUG00000000193 ortholog_one2one 1 retrogene
retro_mmul_1590,
Monodelphis domestica ENSMODG00000027820 possible_ortholog 1 retrogene
retro_mdom_274,
Mus musculus ENSMUSG00000067194 possible_ortholog 1 retrogene
retro_mmus_264,
Otolemur garnettii ENSOGAG00000008182 ortholog_one2one 1 retrogene
retro_ogar_128,
Pongo abelii ENSPPYG00000020176 possible_ortholog 1 retrogene
retro_pabe_1185,
Pan troglodytes ENSPTRG00000022504 possible_ortholog 1 retrogene
retro_ptro_978,
Pteropus vampyrus ENSPVAG00000003521 possible_ortholog 2 retrogenes
retro_pvam_780, retro_pvam_92,
Rattus norvegicus ENSRNOG00000005736 possible_ortholog 1 retrogene
retro_rnor_24,
Sorex araneus ENSSARG00000013528 possible_ortholog 1 retrogene
retro_sara_324,
Sarcophilus harrisii ENSSHAG00000010995 possible_ortholog 1 retrogene
retro_shar_707,
Sus scrofa ENSSSCG00000029864 possible_ortholog 1 retrogene
retro_sscr_948,
Ictidomys tridecemlineatus ENSSTOG00000026117 possible_ortholog 1 retrogene
retro_itri_1839,
Tursiops truncatus ENSTTRG00000002012 possible_ortholog 1 retrogene
retro_ttru_1009,
Vicugna pacos ENSVPAG00000009927 possible_ortholog 4 retrogenes
retro_vpac_47, retro_vpac_531, retro_vpac_550, retro_vpac_590,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_66 96.53 100.00
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Download FASTA sequences of all ENSCJAG00000005371 retrocopies