Parental gene:

ENSCING00000004542

Aliases:None
Description:Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:F6Y1K6]
Organism:Vase tunicate (Ciona intestinalis)
Coordinates:HT000157.1:53528..58674(+)


>ENSCING00000004542
ATGTCCGATCCAGACAAATTAAATGTTGATAAAATTATTGCCATGTTGTTAGAGGTGCGAGGTTCTCGGCCGGGGAAAAA
CGTCCAACTTTCGGAGAACGACATTCGTGGTCTTTGTTTAAAGTCAAGGGAGATATTTCTAAGTCAACCTATTCTACTTG
AATTAGAAGCTCCCCTAAAAATATGTGGTGACGTCCACGGGCAATATTATGATTTGTTGAGGTTGTTTGAATACGGAGGT
TTTCCACCGGAGTCGAATTATCTTTTCCTCGGAGATTATGTCGATCGTGGAAAACAATCCTTGGAAACAATAGCTCTGTT
GCTCGCTTACAAAATAAAATATCCGGAGAATTTCTTCCTTTTACGAGGCAACCATGAATGTGCGAGCATCAACAGAATAT
ATGGTTTCTATGATGAATGTAAACGAAGGTACAACATCAAGTTGTGGAAAACATTCACCGATTGTTTCAACTGTCTTCCA
CTGGCTGCAATAATTGATGAGAAGATATTCTGCTGTCATGGAGGGTTATCCCCTGACCTTCAATCAATGGAACAAATCCG
TCGTATAATGCGTCCCACGGATGTTCCCGACCAAGGCCTCTTGTGTGACCTCTTGTGGTCAGATCCTGACAAGGAAGTAT
CAGGTTGGGGTGAGAACGACAGGGGGGTGAGTTTTACATTCGGACCCGAAGTTGTTGCAAAGTTTCTTCACAAACATGAC
CTTGACCTCATATGTAGGGCTCATCAGGTAGTTGAGGACGGATACGAATTCTTCGCGAAACGTCAACTCGTCACTTTGTT
CTCGGCCCCCAATTATTGCGGGGAGTTCGACAACGCAGGGGCCATGATGAGCGTGGATGAAACCTTGATGTGTTCGTTCC
AGATATTGAAACCATCTGACAAGAAGAAGTATCCATACGGTGGCATGGTGTCAGGTCGTCCTGTGACCCCGCCACGAGCC
GGAGCCGCGAAATCTAAACCTGGGAAAAAGTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013861 ortholog_many2many 1 retrogene
retro_amel_1721,
Bos taurus ENSBTAG00000011198 ortholog_many2many 2 retrogenes
retro_btau_6, retro_btau_960,
Callithrix jacchus ENSCJAG00000000983 ortholog_many2many 1 retrogene
retro_cjac_923,
Callithrix jacchus ENSCJAG00000009147 ortholog_many2many 7 retrogenes
retro_cjac_1062, retro_cjac_1165, retro_cjac_1408, retro_cjac_2304, retro_cjac_2535, retro_cjac_3288, retro_cjac_822,
Dasypus novemcinctus ENSDNOG00000007986 ortholog_one2many 3 retrogenes
retro_dnov_2565, retro_dnov_525, retro_dnov_872,
Dipodomys ordii ENSDORG00000010484 ortholog_many2many 2 retrogenes
retro_dord_260, retro_dord_261,
Equus caballus ENSECAG00000017228 ortholog_many2many 1 retrogene
retro_ecab_853,
Echinops telfairi ENSETEG00000015721 ortholog_many2many 1 retrogene
retro_etel_2065,
Macropus eugenii ENSMEUG00000005323 ortholog_many2many 1 retrogene
retro_meug_1748,
Myotis lucifugus ENSMLUG00000010661 ortholog_many2many 2 retrogenes
retro_mluc_15, retro_mluc_2217,
Mus musculus ENSMUSG00000004455 ortholog_many2many 5 retrogenes
retro_mmus_2274, retro_mmus_2968, retro_mmus_3418, retro_mmus_851, retro_mmus_925,
Oryctolagus cuniculus ENSOCUG00000009275 ortholog_many2many 2 retrogenes
retro_ocun_1232, retro_ocun_665,
Pan troglodytes ENSPTRG00000005448 ortholog_many2many 1 retrogene
retro_ptro_2435,
Sorex araneus ENSSARG00000000571 ortholog_many2many 1 retrogene
retro_sara_700,
Tupaia belangeri ENSTBEG00000013852 ortholog_many2many 4 retrogenes
retro_tbel_1710, retro_tbel_2116, retro_tbel_2311, retro_tbel_4450,
Vicugna pacos ENSVPAG00000008411 ortholog_one2many 1 retrogene
retro_vpac_540,
Drosophila melanogaster FBgn0003134 ortholog_many2many 5 retrogenes
retro_dmel_21, retro_dmel_37, retro_dmel_42, retro_dmel_48, retro_dmel_81,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cint_3 94.48 98.79
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Download FASTA sequences of all ENSCING00000004542 retrocopies