Parental gene: | ENSCAFG00000006913 |
| Aliases: | None |
| Description: | None |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 1:116960988..116967493(-) |
>ENSCAFG00000006913
ATGGCAGAAGACATCAAGTCCAAAATCAAGAACTACCAGACTGCCCCTTTTGACAGCCGCTTCCCCAACCAGAACCAGAC
TAGGAACTGCTGGCAGAACTACCTGGACTTCCACCGCTGTGAGAAGGCAATGACTGCTAAAGGGGGTGATGTCTCCGTGT
GCGAATGGTACCGGCGAGTGTACAAGTCCCTCTGCCCCATATCCTGGGTGTCGGCCTGGGATGACCGCCGGGCAGAAGGC
ACATTTCCTGGGAAGATCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012049_cerebellum | 97 .52 RPM |
| SRP017611_brain | 59 .70 RPM |
| SRP017611_kidney | 255 .37 RPM |
| SRP017611_liver | 64 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000000563 | ortholog_one2many | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000010211 | ortholog_many2many | 5 retrogenes | |
| Equus caballus | ENSECAG00000012317 | ortholog_one2many | 3 retrogenes | |
| Felis catus | ENSFCAG00000006378 | ortholog_one2many | 5 retrogenes | |
| Homo sapiens | ENSG00000126267 | ortholog_one2many | 5 retrogenes | |
| Microcebus murinus | ENSMICG00000009902 | ortholog_one2many | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011365 | ortholog_many2many | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000016765 | ortholog_many2many | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000013962 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000006258 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000036751 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011283 | ortholog_one2many | 5 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009606 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000004148 | ortholog_one2many | 4 retrogenes | |
| Oryzias latipes | ENSORLG00000006070 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000010854 | ortholog_one2many | 4 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000012821 | ortholog_one2many | 8 retrogenes | |
| Rattus norvegicus | ENSRNOG00000024309 | ortholog_many2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000010771 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000002907 | ortholog_many2many | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000014563 | ortholog_one2many | 8 retrogenes | |
| Tursiops truncatus | ENSTTRG00000002241 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_6 | 89.53 | 100.00 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
| 2. | retro_cfam_517 | 63.64 | 100.00 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 3. | retro_cfam_775 | 84.88 | 100.00 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 4. | retro_cfam_830 | 64.84 | 100.00 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 5. | retro_cfam_929 | 75.86 | 100.00 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 6. | retro_cfam_1614 | 65.79 | 88.37 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 7. | retro_cfam_1760 | 93.10 | 100.00 | Please wait, loading |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSCAFG00000006913 retrocopies