Parental gene:

RANBP6, ENSBTAG00000039374

Aliases:None
Description:importin-5 [Source:RefSeq peptide;Acc:NP_001032906]
Organism:Cow (Bos taurus)
Coordinates:12:79000722..79039990(+)


>ENSBTAG00000039374
TCTCTCTCTCTCACGCCTAGCGCAATGGCGGCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTCCTGGGAAACCTGCT
CAGCCCCGACAATGTGGTCCGGAAACAGGCAGAGGAAACCTATGAGAATATCCCAGGCCAGTCGAAGATCACATTCCTTT
TACAAGCCATCAGAAACACAGCAGCTGCTGAGGAGGCTAGACAAATGGCTGCCGTTCTCCTAAGACGTCTTTTGTCCTCT
GCATTTGATGAAGTCTATCCAACTCTTCCCACTGATGTTCAGACTGCCATCAAGAGTGAGCTACTGATGATTATTCAAAT
GGAAACACAGTCTAGCATGAGGAAAAAAATTTGTGATATTGCTGCTGAACTGGCCAGGAATTTAATAGATGAGGATGGCA
ACAACCAGTGGCCTGAAGGTTTGAAGTTCCTTTTTGACTCCGTCAGCTCTCAAAACATGGGACTGCGGGAAGCTGCCCTT
CATATTTTCTGGAACTTCCCAGGAATTTTTGGGAATCAGCAGCAACACTATTTAGACGTCATCAAACGGATGTTAGTTCA
GTGCATGCAAGATCAGGAACATCCATCGATCCGAACATTATCTGCTAGAGCTACCGCTGCGTTTATACTTGCCAACGAGC
ATAATGTTGCTCTGTTCAAGCATTTTGCAGACTTGTTACCCGGTTTCTTACAGGCTGTAAACGACTCCTGCTACCAGAAT
GATGATTCAGTCCTAAAATCCCTTGTTGAGATTGCAGACACGGTTCCAAAGTATTTACGTCCTCATTTGGAAGCCACTTT
ACAGCTGAGTCTAAAGTTGTGTGGAGACACTGGCCTCAATAACATGCAGCGCCAGCTTGCCCTGGAAGTAATCGTGACCC
TCTCTGAGACTGCAGCTGCTATGTTAAGAAAACATACCAATATTGTTGCACAGACAATTCCGCAGATGTTAGCCATGATG
GTTGACCTTGAAGAGGATGAGGACTGGGCAAATGCGGATGAACTGGAAGATGATGACTTTGATAGCAATGCGGTTGCTGG
TGAGAGTGCTCTAGACCGGATGGCTTGTGGACTCGGTGGAAAGCTCGTCCTGCCAATGATCAAAGAACACATTATGCAGA
TGCTTCAGAACCCTGACTGGAAGTACCGGCACGCGGGGCTCATGGCCTTGTCCGCCATTGGGGAAGGATGCCACCAGCAG
ATGGAGGGGATTCTCAACGAGATAGTAAATTTTGTTCTGCTTTTTCTTCAGGATCCTCATCCCAGGGTGAGGTATGCGGC
CTGTAATGCTGTGGGACAGATGGCTACTGACTTTGCACCTGGTTTCCAGAAGAAGTTCCATGAGAAGGTGATTGCAGCAC
TGCTGCAGACCATGGAAGACCAGGGCAATCAGCGTGTCCAGGCCCACGCTGCCGCCGCTCTCATCAACTTCACAGAGGAC
TGTCCCAAGTCACTGCTTATTCCATACTTAGACAGCTTGGTGAAGCATCTGCATTCCATCATGGTCCTTAAACTTCAAGA
GTTGATCCAGAAAGGCACCAAGTTAGTTTTGGAACAAGTTGTGACGTCTATTGCATCAGTTGCAGATACTGCAGAAGAAA
AATTTGTCCCCTACTATGACTTATTCATGCCGTCACTGAAGCACATTGTCGAGAATGCAGTTCAAAAGGAACTCAGACTT
CTCAGAGGAAAAACTATTGAGTGCATCAGCCTCATTGGTCTGGCTGTTGGGAAGGAAAAGTTCATGCAGGATGCCTCTGA
CGTGATGCAGCTGTTGCTGAAGACGCAAACAGACTTCAGTGACATGGAAGATGACGACCCTCAGATCTCTTACATGATCT
CCGCATGGGCCAGGATGTGCAAAATCCTTGGGAAAGAATTTCAGCAGTACCTACCGGTGGTGATGGGGCCTTTAATGAAG
ACAGCTTCAATTAAGCCTGAAGTAGCCCTTCTAGATACTCAAGACATGGAGAACATGAGTGATGATGATGGTTGGGAATT
TGTGAACCTTGGAGATCAGCAAAGTTTTGGTATTAAAACTGCAGGACTGGAAGAAAAATCAACTGCTTGTCAGATGCTGG
TCTGTTATGCTAAGGAGTTAAAAGAAGGCTTTGTGGAGTATACTGAACAGGTTGTCAAACTCATGGTACCTCTACTGAAA
TTTTATTTCCACGATGATATCCTAATAAAACGCGTTCGAGTGGCAGCAGCAGAATCCATGCCTCTTCTCCTGGAGTGTGC
GAGGGTTCGTGGTCCTGAGTACCTCACACAGATGTGGCATTTTATGTGTGATGCGCTAATCAAGGCCATTGGCACAGAAC
CAGATTCAGATGTCCTCTCAGAAATAATGCATTCTTTTGCAAAGTGCATTGAAGTCATGGGAGATGGATGCCTTAATAAT
GAACACTTTGAAGAATTGGGTGGTATACTGAAAGCTAAACTTGAAGAACATTTTAAAAACCAAGAATTGCGGCAAGTTAA
AAGACAAGATGAAGACTATGATGAGCAGGTGGAAGAATCACTACAAGATGAGGATGATAATGATGTTTATATTCTGACCA
AAGTGTCAGACATTTTACATTCAATATTCAGTAGCTACAAGGAAAAAGTGTTACCATGGTTTGAACAGCTGCTTCCGTTA
ATTGTCAACCTAATTTGTCCACATAGACCGTGGCCAGACAGACAGTGGGGACTGTGCATCTTTGATGATGTCATAGAACA
CTGTAGTCCAGCCTCATTTAAATATGCAGAATATTTCTTAAGGCCAATGCTCCAATACGTATGTGACAGCAGCCCGGAAG
TCAGGCAAGCAGCTGCATATGGCCTGGGAGTCATGGCACAGTATGGTGGCGATAACTACCGTCCTTTCTGCACAGAAGCA
CTTCCACTGCTGGTAAGAGTTATTCAGTCTGCTGATGCTAAGACCAAAGAAAACATCAATGCTACTGAGAACTGCATCTC
AGCGGTGGGGAAAATGATGAAGTTCAAGCCTGACTGTGTGAACGTTGAAGAAGTCCTCCCACACTGGCTTTCTTGGCTTC
CACTGCATGAGGATAAAGAAGAAGCTGTTCAGACTTTCAATTATCTTTGCGACCTCATTGAGAGTAATCACCCAATTGTC
CTTGGCCCAAACAATACCAATCTGCCCAAAATATTCAGTATAATCGCAGAAGGAGAAATGCATGAGGCAATTAAACATGA
TGATCCTTGTGCCAAACGTCTGGCCAATGTAGTTCGCCAAGTACAGACTTCTGGAGGACTGTGGACTGAATGCATAGCGC
AGCTCAGTCCCGAGCAGCAGGCAGCCATACAGGAGCTCCTGAACTCTGCCTGA

Library Parental gene expression (RPM)
ERP005899_liver 52 .99 RPM
ERP005899_muscle 274 .66 RPM
SRP017611_brain 108 .31 RPM
SRP017611_kidney 137 .15 RPM
SRP017611_liver 60 .10 RPM
SRP030211_testis 679 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003784 ortholog_one2one 1 retrogene
retro_amel_3,
Canis familiaris ENSCAFG00000005561 ortholog_one2one 1 retrogene
retro_cfam_452,
Choloepus hoffmanni ENSCHOG00000006061 ortholog_one2many 1 retrogene
retro_chof_11,
Cavia porcellus ENSCPOG00000004827 ortholog_one2one 2 retrogenes
retro_cpor_265, retro_cpor_57,
Equus caballus ENSECAG00000014808 ortholog_one2one 1 retrogene
retro_ecab_37,
Felis catus ENSFCAG00000025657 ortholog_one2one 1 retrogene
retro_fcat_24,
Homo sapiens ENSG00000065150 ortholog_one2one 1 retrogene
retro_hsap_57,
Gorilla gorilla ENSGGOG00000008742 ortholog_one2one 1 retrogene
retro_ggor_47,
Loxodonta africana ENSLAFG00000016190 ortholog_one2one 1 retrogene
retro_lafr_22,
Myotis lucifugus ENSMLUG00000006500 ortholog_one2one 1 retrogene
retro_mluc_295,
Mus musculus ENSMUSG00000030662 ortholog_one2one 2 retrogenes
retro_mmus_251, retro_mmus_3683,
Nomascus leucogenys ENSNLEG00000007831 ortholog_one2one 2 retrogenes
retro_nleu_1610, retro_nleu_2482,
Oryctolagus cuniculus ENSOCUG00000003898 ortholog_one2one 1 retrogene
retro_ocun_143,
Otolemur garnettii ENSOGAG00000007570 ortholog_one2one 1 retrogene
retro_ogar_169,
Pongo abelii ENSPPYG00000005458 ortholog_one2one 1 retrogene
retro_pabe_172,
Pan troglodytes ENSPTRG00000005984 ortholog_one2one 2 retrogenes
retro_ptro_49, retro_ptro_745,
Pteropus vampyrus ENSPVAG00000004516 ortholog_one2one 1 retrogene
retro_pvam_8,
Rattus norvegicus ENSRNOG00000010989 ortholog_one2one 1 retrogene
retro_rnor_240,
Sus scrofa ENSSSCG00000009509 ortholog_one2one 1 retrogene
retro_sscr_24,
Ictidomys tridecemlineatus ENSSTOG00000011164 ortholog_one2one 1 retrogene
retro_itri_32,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_104 76.90 65.14
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Download FASTA sequences of all ENSBTAG00000039374 retrocopies