Parental gene:

EIF3E, ENSBTAG00000006702

Aliases:EIF3E, EIF3S6
Description:Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:Q3T102]
Organism:Cow (Bos taurus)
Coordinates:14:58397834..58445787(+)


>ENSBTAG00000006702
ATGGCGGAGTACGACTTGACTACTCGCATCGCGCACTTTTTAGATCGGCATTTAGTCTTTCCGTTGCTTGAGTTTCTCTC
CGTAAAAGAGATATATAATGAAAAGGAGTTGTTACAAGGGAAATTGGATCTTCTTAGTGATACCAACATGGTAGACTTTG
CTATGGATGTGTACAAAAACCTTTATTCTGATGATATTCCTCATGCTTTGAGAGAAAAAAGAACAACTGTTGTTGCACAG
CTGAAACAGCTTCAAGCAGAAACTGAACCAATTGTGAAGATGTTTGAAGATCCAGAAACTACAAGGCAAATGCAGTCAAC
CAGGGATGGTCGGATGCTGTTTGACTACCTGGCAGACAAGCATGGTTTCAGGCAGGAATATTTAGATACACTGTACAGGT
ATGCAAAATTCCAGTATGAATGTGGAAATTACTCTGGAGCAGCAGAATATCTTTACTTCTTTAGAGTGTTGGTTCCAGCA
ACGGATAGAAATGCTTTGAGTTCACTCTGGGGAAAACTGGCCTCTGAGATCTTAATGCAGAATTGGGATGCAGCCATGGA
AGACCTGACACGGCTAAAAGAGACCATAGATAATAATTCTGTGAGTTCTCCACTTCAGTCTCTTCAGCAGCGGACATGGC
TTATTCATTGGTCTCTGTTTGTTTTCTTCAATCATCCCAAAGGGCGCGATAACATTATTGATCTCTTCCTTTACCAGCCA
CAGTATCTTAATGCAATTCAAACGATGTGTCCACATATTCTCCGCTACTTGACCACAGCAGTCATAACAAACAAAGATGT
TCGAAAACGCCGGCAGGTGCTAAAAGATCTGGTCAAAGTTATTCAGCAGGAGTCTTACACATATAAAGACCCAATTACAG
AATTTGTTGAATGCTTATATGTTAATTTTGACTTTGATGGGGCTCAGAAAAAGCTAAGGGAATGTGAATCAGTACTAGTG
AATGATTTCTTCTTGGTGGCTTGTCTTGAGGATTTCATTGAAAATGCCCGTCTGTTCATATTTGAGACTTTTTGTCGCAT
CCATCAGTGTATCAGCATTAACATGTTGGCAGATAAACTGAACATGACTCCAGAAGAAGCTGAAAGGTGGATTGTAAATT
TGATTAGAAATGCAAGGCTGGATGCCAAGATTGATTCTAAATTAGGTCATGTGGTTATGGGTAACAATGCAGTCTCACCC
TATCAGCAAGTGATTGAAAAGACCAAAAGCCTTTCATTTAGAAGCCAGATGTTGGCCATGAATATTGAGAAGAAACTTAA
TCAGAATAGTAGGTCAGAGGCTCCTAACTGGGCAGCTCAGGACTCTGGCTTCTACTGA

Library Parental gene expression (RPM)
ERP005899_liver 208 .21 RPM
ERP005899_muscle 321 .27 RPM
SRP017611_brain 63 .72 RPM
SRP017611_kidney 129 .92 RPM
SRP017611_liver 61 .61 RPM
SRP030211_testis 170 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000000702 ortholog_one2one 1 retrogene
retro_cfam_1127,
Callithrix jacchus ENSCJAG00000006458 ortholog_one2one 3 retrogenes
retro_cjac_2333, retro_cjac_2686, retro_cjac_701,
Equus caballus ENSECAG00000000236 ortholog_one2one 1 retrogene
retro_ecab_860,
Echinops telfairi ENSETEG00000013105 ortholog_one2one 1 retrogene
retro_etel_2048,
Felis catus ENSFCAG00000003665 ortholog_one2one 1 retrogene
retro_fcat_231,
Homo sapiens ENSG00000104408 ortholog_one2one 1 retrogene
retro_hsap_3489,
Gorilla gorilla ENSGGOG00000022955 ortholog_one2one 2 retrogenes
retro_ggor_2354, retro_ggor_2355,
Myotis lucifugus ENSMLUG00000007269 ortholog_one2one 1 retrogene
retro_mluc_1796,
Macaca mulatta ENSMMUG00000011359 ortholog_one2one 1 retrogene
retro_mmul_2585,
Mustela putorius furo ENSMPUG00000005924 ortholog_one2one 2 retrogenes
retro_mputfur_193, retro_mputfur_736,
Mus musculus ENSMUSG00000022336 ortholog_one2one 2 retrogenes
retro_mmus_1801, retro_mmus_2807,
Nomascus leucogenys ENSNLEG00000004120 ortholog_one2one 1 retrogene
retro_nleu_333,
Oryctolagus cuniculus ENSOCUG00000008050 ortholog_one2one 1 retrogene
retro_ocun_1399,
Pan troglodytes ENSPTRG00000020505 ortholog_one2one 1 retrogene
retro_ptro_2362,
Rattus norvegicus ENSRNOG00000027690 ortholog_one2one 4 retrogenes
retro_rnor_1133, retro_rnor_2879, retro_rnor_583, retro_rnor_584,
Ictidomys tridecemlineatus ENSSTOG00000008976 ortholog_one2one 1 retrogene
retro_itri_545,
Tursiops truncatus ENSTTRG00000011025 ortholog_one2one 2 retrogenes
retro_ttru_1602, retro_ttru_1794,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_291 62.35 54.16
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Download FASTA sequences of all ENSBTAG00000006702 retrocopies