Parental gene:

SMS, ENSVPAG00000007543

Aliases:None
Description:spermine synthase [Source:HGNC Symbol;Acc:11123]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_1984:675893..720689(+)


>ENSVPAG00000007543
CCCCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGATG
GTGAGACCATTCTGAAAGGCCTCCAGTCCATTTTCCAGGAGAAGGGGATGACGGAGTCGGTGCACACCTGGCAGGACCAT
GGTTATTTAGCGACCTACATAAACAAAAATGGCAGCTTTGCCAATTTGAGAATTTACCCACATGGACTGGTGTTGCTGGA
CCTTCAGAGTTACGACGGGGATGCGCAAGGCAAAGAAGTTGACAGTCTTTTGAACAAAGTAGAAGAAAGAATGAAAGAAT
TGAGTCAGGACAGTACTGAGCGGGTGAAGCGCTTACCACCCATAGTTCGAGGAGGGGCCATTGACAGATACTGGCCCACT
GCCGATGGCCGTCTGGTTGAGTACGACATAGATGAAGTGGTGTATGATGAAGACTCACCTTACCAGAACATTAAAATTTT
ACACTCGAAACAATTTGGAAACATTCTCATCCTTAGTGGGGATGTTAATTTGGCAGAAAGTGACTTGGCGTATACCCGGG
CCATCATGGGCAGTGGCAAGGAAGATTACACCGGCAAAGATGTACTCATTCTGGGAGGTGGAGATGGGGGCATATTATGT
GAAATAGTCAAACTGAAACCAAAGATGGTCACTATGGTAGAGATTGACCAAATGGTGATTGACGGATGTAAGAAATACAT
GCGAAAAACGTGTGGCGATGTCTTAGACAATCTTAAAGGAGACTGCTATCAGGTTCTAATAGAAGACTGTATTCCAGTCC
TGAAGAGGTACGCCAAAGAAGGGAGAGAGTTTGATTATGTGATTAATGATTTGACAGCTGTTCCAATCTCCACATCTCCA
GAAGAAGATTCCACATGGGAGTTTCTCAGACTGATTCTTGACCTCTCAATGAAAGTATTGAAACAGGATGGGAAATATTT
TACACAGGGGAACTGTGTCAATTTGACGGAAGCCCTGTCACTCTATGAAGAACAGCTGGGGCGCCTGTATTGTCCTGTGG
AATTCTCGAAGGAGATTGTCTGTGTCCCTTCATACTTGGAATTGTGGGTATTTTACACTGTTTGGAAGAAAGCTAAACCT
TGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018382 ortholog_one2one 1 retrogene
retro_btau_1412,
Canis familiaris ENSCAFG00000013284 ortholog_one2one 3 retrogenes
retro_cfam_1076, retro_cfam_1995, retro_cfam_613,
Callithrix jacchus ENSCJAG00000033933 possible_ortholog 1 retrogene
retro_cjac_518,
Echinops telfairi ENSETEG00000010098 ortholog_one2one 2 retrogenes
retro_etel_1066, retro_etel_1540,
Gorilla gorilla ENSGGOG00000003123 possible_ortholog 3 retrogenes
retro_ggor_1335, retro_ggor_2437, retro_ggor_3009,
Myotis lucifugus ENSMLUG00000013185 possible_ortholog 3 retrogenes
retro_mluc_471, retro_mluc_530, retro_mluc_92,
Macaca mulatta ENSMMUG00000020392 possible_ortholog 2 retrogenes
retro_mmul_2003, retro_mmul_2574,
Monodelphis domestica ENSMODG00000007897 ortholog_one2many 1 retrogene
retro_mdom_412,
Oryctolagus cuniculus ENSOCUG00000006016 possible_ortholog 2 retrogenes
retro_ocun_1458, retro_ocun_1918,
Pongo abelii ENSPPYG00000020182 possible_ortholog 4 retrogenes
retro_pabe_2649, retro_pabe_2810, retro_pabe_3752, retro_pabe_38,
Pteropus vampyrus ENSPVAG00000016785 ortholog_one2one 1 retrogene
retro_pvam_524,
Rattus norvegicus ENSRNOG00000007688 possible_ortholog 2 retrogenes
retro_rnor_1934, retro_rnor_938,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_50 99.14 87.00
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Download FASTA sequences of all ENSVPAG00000007543 retrocopies