Parental gene:

ENSTTRG00000014225

Aliases:None
Description:None
Organism:Dolphin (Tursiops truncatus)
Coordinates:scaffold_108179:313444..318674(+)


>ENSTTRG00000014225
ATGGAGGTAAAACCGCCGCCCGGCCGCCCCCAGCCCGACTCCGGCCGTCGCCGTCGCCGCCGGGGGGAGGAGGGTCATGA
TCCAAAGGAACCAGAACAGTTGAGAAAACTGTTTATTGGTGGTCTGAGCTTTGAAACTACAGATGATAGCTTAAGAGAAC
ATTTTGAGAAATGGGGCACACTTACAGATTGTGTGGTGATGAGAGACCCCCAAACAAAACGTTCCAGGGGCTTTGGTTTT
GTTACTTACTCTTGTGTTGAAGAGGTGGATGCAGCAATGTGTGCTCGACCACACAAGGTTGATGGGCGTGTAGTGGAACC
AAAGAGAGCTGTTTCTAGAGAGGATTCTGTAAAGCCTGGTGCCCATCTAACAGTGAAGAAAATTTTTGTTGGTGGTATTA
AAGAAGATACAGAAGAATATAATTTGAGAGACTACTTTGAAAAGTATGGCAAGATTGAAACCATAGAAGTTATGGAAGAC
AGGCAGAGTGGAAAAAAGAGAGGATTTGCTTTTGTAACTTTTGATGATCATGATACAGTTGATAAAATTGTTGTTCAGAA
ATACCACACTATTAATGGTCATAATTGTGAAGTGAAAAAGGCCCTTTCTAAACAAGAAATGCAATCTGCTGGATCACAGA
GAGGTCGTGGAGGTGGATCTGGCAACTTTATGGGTCGTGGAGGAAACTTTGGAGGTGGTGGAGGTAACTTTGGCCGTGGT
GGAAACTTTGGTGGAAGAGGAGGGTATGGTGGTGGAGGTGGTGGCAGCAGAGGTAGTTATGGAGGAGGTGATGGTGGATA
TAATGGATTTGGAGGCGACGGTGGTAACTATGGCGGTGGTCCTGGTTACAGTAGTAGAGGAGGCTATGGTGGTGGTGGAC
CAGGATATGGAAACCAAGGTGGTGGATATGGTGGCGGTGGTGGAGGATATGATGGTTACAATGAAGGAGGAAATTTTGGA
GGTGGTAACTATGGTGGTGGTGGGAGTTATAATGATTTTGGAAATTACAGTGGACAACAGCAATCAAATTATGGACCCAT
GAAAGGGGGCAGTTTTGGTGGAAGAAGCTCGGGAAGTCCCTATGGTGGTGGTTATGGATCTGGTGGTGGAAGTGGTGGAT
ATGGTAGCAGAAGGTTCTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011920 possible_ortholog 4 retrogenes
retro_amel_1407, retro_amel_557, retro_amel_715, retro_amel_765,
Cavia porcellus ENSCPOG00000004251 ortholog_one2many 3 retrogenes
retro_cpor_1516, retro_cpor_1543, retro_cpor_65,
Ficedula albicollis ENSFALG00000003215 ortholog_one2many 1 retrogene
retro_falb_15,
Gallus gallus ENSGALG00000009250 ortholog_one2many 1 retrogene
retro_ggal_10,
Monodelphis domestica ENSMODG00000019803 possible_ortholog 1 retrogene
retro_mdom_1590,
Mustela putorius furo ENSMPUG00000014103 ortholog_one2many 6 retrogenes
retro_mputfur_1141, retro_mputfur_1336, retro_mputfur_1545, retro_mputfur_603, retro_mputfur_674, retro_mputfur_779,
Oryctolagus cuniculus ENSOCUG00000002743 possible_ortholog 2 retrogenes
retro_ocun_994, retro_ocun_995,
Pelodiscus sinensis ENSPSIG00000003011 ortholog_one2many 1 retrogene
retro_psin_16,
Pan troglodytes ENSPTRG00000012676 ortholog_one2many 5 retrogenes
retro_ptro_1059, retro_ptro_2430, retro_ptro_2966, retro_ptro_683, retro_ptro_872,
Rattus norvegicus ENSRNOG00000001556 ortholog_one2many 11 retrogenes
retro_rnor_1510, retro_rnor_1665, retro_rnor_1869, retro_rnor_2053, retro_rnor_2659, retro_rnor_2669, retro_rnor_2713, retro_rnor_2776, retro_rnor_2809, retro_rnor_348, retro_rnor_959,
Sarcophilus harrisii ENSSHAG00000018255 possible_ortholog 1 retrogene
retro_shar_518,
Tarsius syrichta ENSTSYG00000012949 possible_ortholog 2 retrogenes
retro_tsyr_1480, retro_tsyr_2122,
Tursiops truncatus ENSTTRG00000000709 other_paralog 3 retrogenes
retro_ttru_1066, retro_ttru_1204, retro_ttru_1788,
Tursiops truncatus ENSTTRG00000001793 other_paralog 2 retrogenes
retro_ttru_1486, retro_ttru_744,
Tursiops truncatus ENSTTRG00000004505 within_species_paralog 27 retrogenes
retro_ttru_1202, retro_ttru_1223, retro_ttru_1251, retro_ttru_1331, retro_ttru_1362, retro_ttru_156, retro_ttru_157, retro_ttru_1678, retro_ttru_1732, retro_ttru_1806, retro_ttru_1813, retro_ttru_1874, retro_ttru_221, retro_ttru_311, retro_ttru_479, retro_ttru_599, retro_ttru_605, retro_ttru_607, retro_ttru_620, retro_ttru_63, retro_ttru_678, retro_ttru_708, retro_ttru_812, retro_ttru_882, retro_ttru_902, retro_ttru_926, retro_ttru_981,
Tursiops truncatus ENSTTRG00000007592 other_paralog 1 retrogene
retro_ttru_1913,
Xenopus tropicalis ENSXETG00000001806 ortholog_one2many 1 retrogene
retro_xtro_11,
Xiphophorus maculatus ENSXMAG00000000439 ortholog_one2many 1 retrogene
retro_xmac_2,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_9 54.28 79.42
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2. retro_ttru_675 64.73 67.28
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3. retro_ttru_1459 94.22 73.09
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Download FASTA sequences of all ENSTTRG00000014225 retrocopies