Parental gene:

HNRNPD, ENSTTRG00000007592

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) [Source:HGNC Symbol;Acc:5036]
Organism:Dolphin (Tursiops truncatus)
Coordinates:scaffold_84980:39380..54927(-)


>ENSTTRG00000007592
ATGTCGGAGGAGCAGTTTGGCGGGGACGGGGCGGCGGCGGCAGCAACAGCGGCGGTAGGCGGCTCGGCGGGCGAACAGGA
GGGAGCCATGGTGGCGGCGGCGCAGGGGGCAGCGGCGGCGGCGGGAAGCGGAGCCGGGACCGGGGGCGGAACCGCGGCCG
GAGGCACCGAAGGAGGCAGCGCCGAGTCGGAGGGGGCGAAGATCGATGCCAGTAAGAACGAGGAGGATGAAGGCCATTCA
AACTCCTCCCCACGACACTCTGAAGCAGCGACGGCACAGCGGGAAGAATGGAAAATGTTTATAGGAGGCCTTAGCTGGGA
CACTACAAAGAAAGATCTGAAGGACTACTTCTCCAAATTTGGTGAAGTCGTAGACTGCACTCTGAAGTTAGATCCTATCA
CAGGGCGATCAAGGGGTTTTGGCTTTGTGCTATTTAAAGAGTCGGAGAGTGTAGATAAGGTCATGGATCAGAAAGAACAT
AAATTGAATGGGAAGGTGATTGATCCTAAGAGGGCCAAAGCCATGAAAACAAAAGAGCCTGTTAAAAAAATTTTTGTTGG
TGGCCTTTCTCCAGATACACCTGAAGAGAAAATAAGGGAGTACTTTGGTGGTTTTGGTGAGGTTGAATCCATAGAGCTCC
CCATGGACAACAAGACCAATAAGAGGCGTGGATTCTGCTTTATTACCTTTAAGGAAGAGGAACCAGTGAAGAAGATAATG
GAAAAGAAATACCACAATGTTGGTCTTAGTAAATGTGAAATAAAAGTAGCTATGTCGAAGGAACAGTATCAGCAACAGCA
ACAGTGGGGATCTAGAGGAGGATTTGCAGGAAGAGCTCGTGGAAGAGGTGGTGGCCCCAGTCAAAACTGGAACCAGGGAT
ATAGTAACTATTGGAATCAAGGCTATGGCAACTATGGATATAACAGCCAAGGTTACGGTGGTTATGGAGGATATGACTAC
ACTGGTTACAACAACTACTATGGATATGGTGATTATAGCAACCAGCAGAGTGGTTATGGGAAAGTATCCAGGCGAGGTGG
TCATCAAAATAGCTACAAACCATACTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015165 ortholog_one2many 1 retrogene
retro_cjac_2796,
Dipodomys ordii ENSDORG00000012507 ortholog_one2one 1 retrogene
retro_dord_649,
Homo sapiens ENSG00000138668 ortholog_one2one 1 retrogene
retro_hsap_4689,
Gorilla gorilla ENSGGOG00000026760 ortholog_one2one 1 retrogene
retro_ggor_2916,
Loxodonta africana ENSLAFG00000016483 ortholog_one2one 1 retrogene
retro_lafr_686,
Pan troglodytes ENSPTRG00000016215 ortholog_one2one 1 retrogene
retro_ptro_3116,
Sarcophilus harrisii ENSSHAG00000013312 ortholog_one2one 1 retrogene
retro_shar_752,
Tarsius syrichta ENSTSYG00000010395 ortholog_one2one 3 retrogenes
retro_tsyr_1092, retro_tsyr_2070, retro_tsyr_269,
Tursiops truncatus ENSTTRG00000000709 within_species_paralog 3 retrogenes
retro_ttru_1066, retro_ttru_1204, retro_ttru_1788,
Tursiops truncatus ENSTTRG00000001793 within_species_paralog 2 retrogenes
retro_ttru_1486, retro_ttru_744,
Tursiops truncatus ENSTTRG00000004505 other_paralog 27 retrogenes
retro_ttru_1202, retro_ttru_1223, retro_ttru_1251, retro_ttru_1331, retro_ttru_1362, retro_ttru_156, retro_ttru_157, retro_ttru_1678, retro_ttru_1732, retro_ttru_1806, retro_ttru_1813, retro_ttru_1874, retro_ttru_221, retro_ttru_311, retro_ttru_479, retro_ttru_599, retro_ttru_605, retro_ttru_607, retro_ttru_620, retro_ttru_63, retro_ttru_678, retro_ttru_708, retro_ttru_812, retro_ttru_882, retro_ttru_902, retro_ttru_926, retro_ttru_981,
Tursiops truncatus ENSTTRG00000014225 other_paralog 3 retrogenes
retro_ttru_1459, retro_ttru_675, retro_ttru_9,
Vicugna pacos ENSVPAG00000004374 ortholog_one2one 2 retrogenes
retro_vpac_484, retro_vpac_97,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_1913 89.11 56.62
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Download FASTA sequences of all ENSTTRG00000007592 retrocopies