Parental gene:

HNRNPD, ENSLAFG00000016483

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_30:14041146..14055461(+)


>ENSLAFG00000016483
CATTCAAACTCCTCCCCACGACACACTGAAGCAGCGACGGCACAGCGGGAAGAATGGAAAATGTTTATAGGAGGCCTTAG
CTGGGACACTACAAAGAAAGATCTGAAGGACTACTTCTCTAAATTTGGTGAAGTTGTAGACTGCACTCTGAAGTTAGATC
CTATCACAGGGCGATCAAGGGGTTTTGGCTTTGTGCTATTTAAAGAGTCGGAGAGTGTAGATAAGGTCATGGATCAGAAA
GAACATAAATTGAATGGGAAAGTGATTGATCCTAAAAGGGCCAAAGCCATGAAAACAAAAGAACCTGTTAAAAAAATTTT
CGTTGGTGGCCTTTCTCCAGATACACCTGAGGAGAAAATAAGGGAGTACTTTGGTGGTTTTGGTGAGGTGGAATCCATAG
AGCTCCCCATGGACAACAAGACCAATAAGAGGCGTGGATTCTGCTTTATTACCTTTAAGGAAGAGGAACCAGTGAAAAAG
ATAATGGAAAAGAAATACCACAATGTTGGTCTTAGTAAATGTGAAATAAAAGTAGCCATGTCAAAGGAACAGTATCAACA
ACAGCAGCAGTGGGGATCTAGAGGCGGATTTGCAGGAAGAGCTCGTGGAAGAGGTGGTGGCCCCAGTCAAAACTGGAACC
AGGGATATAGTAACTATTGGAATCAAGGCTATGGCAACTATGGATATAACAGCCAAGGTTACGGTGGTTATGGAGGATAT
GACTACACTGGTTACAACAACTACTATGGATATGGTGATTATAGCAACCAGCAGAGTGGTTATGGGAAAGTATCCAGGCG
AGGTGGTCATCAAAATAGCTACAAACCATACTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015165 ortholog_one2many 1 retrogene
retro_cjac_2796,
Dipodomys ordii ENSDORG00000012507 ortholog_one2one 1 retrogene
retro_dord_649,
Homo sapiens ENSG00000138668 ortholog_one2one 1 retrogene
retro_hsap_4689,
Gorilla gorilla ENSGGOG00000026760 ortholog_one2one 1 retrogene
retro_ggor_2916,
Loxodonta africana ENSLAFG00000001189 within_species_paralog 1 retrogene
retro_lafr_405,
Loxodonta africana ENSLAFG00000008612 within_species_paralog 1 retrogene
retro_lafr_650,
Loxodonta africana ENSLAFG00000029587 other_paralog 5 retrogenes
retro_lafr_1202, retro_lafr_1208, retro_lafr_192, retro_lafr_747, retro_lafr_961,
Pan troglodytes ENSPTRG00000016215 ortholog_one2one 1 retrogene
retro_ptro_3116,
Sarcophilus harrisii ENSSHAG00000013312 ortholog_one2one 1 retrogene
retro_shar_752,
Tarsius syrichta ENSTSYG00000010395 ortholog_one2one 3 retrogenes
retro_tsyr_1092, retro_tsyr_2070, retro_tsyr_269,
Tursiops truncatus ENSTTRG00000007592 ortholog_one2one 1 retrogene
retro_ttru_1913,
Vicugna pacos ENSVPAG00000004374 ortholog_one2one 2 retrogenes
retro_vpac_484, retro_vpac_97,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_686 77.33 54.15
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Download FASTA sequences of all ENSLAFG00000016483 retrocopies