Parental gene: | G3BP1, ENSTBEG00000004386 |
| Aliases: | None |
| Description: | GTPase activating protein (SH3 domain) binding protein 1 [Source:HGNC Symbol;Acc:30292] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_372:456..11884(+) |
>ENSTBEG00000004386
GGTTCTGTTGCAAATAAATTTTATGTTCACAATGATATCTTCAGATACCAAGATGAGGTTTTTGGTGGTTTTGTCACTGA
GCCTCAGGAGGAATCTGAGGAAGAAGTAGAGGAACCTGAAGAAAGACAACAGACACCTGAGGTGGTACCTGATGATTCTG
GAACTTTCTATGATCAGAGTGTCAGCAATGACTTGGAAGAACATTTAGAGGAGCCTGTTGCTGAACCAGAGCCTGATCCT
GAACCAGAACCAGAACAAGAACCTGTATCTGAAATCCAAGAGGAAAAGTCTGAGCCAGTGTTAGAAGAAACTGCCCCTGA
GGATACTCAGAAGAGTTCTTCTCCAGCACCTACAGACATAGCTCAGACAGTACAGNNNNNNNNNNNNACGTTTTCTTGGG
CATCTGTAACCAGTAAAAACCTTCCACCCAGTGGAGCTGTTCCAGTTACTGGGATACCACCTCATGTTGTTAAAGTACCG
GCTTCACAGCCCCGCCCAGAATCGAAGCCTGAATCTCAGATTCCACCACAGAGGCCTCAAAGGGATCAAAGAGTGCGAGA
ACAACGAATAAATATTCCTCCACAGAGGGGACCCAGACCAATCCGTGAGACTGGCGAGCAAGGTGATGTTGAACCCCGAA
GGATTGTGAGACATCCTGATAGTCACCAGCTCTTCATTGGCAACCTGCCTCATGAGGTGGACAAGTCAGAGCTTAAAGAT
TTCTTTCAAAATTATGGGAATGTGGTGGAGCTGCGCATTAACAGTGGTGGGAAATTACCCAATTTTGGATTCGTTGTGTT
TGATGATTCTGAGCCTGTTCAGAAGGTCCTTAGCAACAGGCCCATCATGTTCAGAGGTGAGGTCCGTCTGAATGTCGAAG
AGAAGAAGACTCGAGCTGCCAGGGAAGGGGACCGCCGAGATAACCGCCTGCGGGGACCTGGAGGCCCTCGAGGTGGGCTT
GGTGGTGGAATGAGAGGCCCTCCCCGTGGAGGCATGGTGCAGAAACCAGGATTTGGAGTGGGAAGGGGGATTGCTCCAAG
GCAGTGA
GGTTCTGTTGCAAATAAATTTTATGTTCACAATGATATCTTCAGATACCAAGATGAGGTTTTTGGTGGTTTTGTCACTGA
GCCTCAGGAGGAATCTGAGGAAGAAGTAGAGGAACCTGAAGAAAGACAACAGACACCTGAGGTGGTACCTGATGATTCTG
GAACTTTCTATGATCAGAGTGTCAGCAATGACTTGGAAGAACATTTAGAGGAGCCTGTTGCTGAACCAGAGCCTGATCCT
GAACCAGAACCAGAACAAGAACCTGTATCTGAAATCCAAGAGGAAAAGTCTGAGCCAGTGTTAGAAGAAACTGCCCCTGA
GGATACTCAGAAGAGTTCTTCTCCAGCACCTACAGACATAGCTCAGACAGTACAGNNNNNNNNNNNNACGTTTTCTTGGG
CATCTGTAACCAGTAAAAACCTTCCACCCAGTGGAGCTGTTCCAGTTACTGGGATACCACCTCATGTTGTTAAAGTACCG
GCTTCACAGCCCCGCCCAGAATCGAAGCCTGAATCTCAGATTCCACCACAGAGGCCTCAAAGGGATCAAAGAGTGCGAGA
ACAACGAATAAATATTCCTCCACAGAGGGGACCCAGACCAATCCGTGAGACTGGCGAGCAAGGTGATGTTGAACCCCGAA
GGATTGTGAGACATCCTGATAGTCACCAGCTCTTCATTGGCAACCTGCCTCATGAGGTGGACAAGTCAGAGCTTAAAGAT
TTCTTTCAAAATTATGGGAATGTGGTGGAGCTGCGCATTAACAGTGGTGGGAAATTACCCAATTTTGGATTCGTTGTGTT
TGATGATTCTGAGCCTGTTCAGAAGGTCCTTAGCAACAGGCCCATCATGTTCAGAGGTGAGGTCCGTCTGAATGTCGAAG
AGAAGAAGACTCGAGCTGCCAGGGAAGGGGACCGCCGAGATAACCGCCTGCGGGGACCTGGAGGCCCTCGAGGTGGGCTT
GGTGGTGGAATGAGAGGCCCTCCCCGTGGAGGCATGGTGCAGAAACCAGGATTTGGAGTGGGAAGGGGGATTGCTCCAAG
GCAGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000006626 | possible_ortholog | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000018758 | ortholog_one2one | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000017447 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000022143 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000013186 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009072 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_2177 | 84.15 | 70.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_2295 | 79.94 | 95.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_2296 | 75.37 | 95.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tbel_2327 | 73.17 | 70.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_tbel_2352 | 78.90 | 62.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_tbel_2460 | 82.04 | 95.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_tbel_2461 | 85.43 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_tbel_3889 | 78.87 | 55.75 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_tbel_3928 | 87.68 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_tbel_4180 | 76.45 | 69.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_tbel_4190 | 80.75 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_tbel_4246 | 65.28 | 61.21 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000004386 retrocopies