Parental gene: | TMEM50A, ENSSTOG00000022246 |
| Aliases: | None |
| Description: | transmembrane protein 50A [Source:HGNC Symbol;Acc:30590] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393284.1:10013986..10037248(+) |
>ENSSTOG00000022246
ATGTCTGGATTTCTAGAAGGTATGAGATGCTCAGAATGCATTGATTGGGGGGAAAAACGAAATACTATTGCCTCTGTTGC
TGCCGGTGTTCTGTTTTTTACAGGCTGGTGGATCATCATAGATGCAGCTGTTATGTATCCCACTATGGAAGAGTTCAACC
ACTCGTACCATGCCTGTGGTGTGATAGCGACCATTGCCTTCCTCATGATTAATGCAGTATCGAATGGACAAGTCCGCGGT
GATAGCTACAGTGAAGGTTGTCTTGGTCAAACAGGTGCTCGCATCTGGCTGTTCCTGGGTTTCATGCTGGCCTTCGGCTC
TCTGATCACATCAATGTGGATTCTCTTTGGAGGTTATGTTGCTAAAGAAAAACCCATAGTGTATCCTGGAATCGCTGTGT
TTTTCCAGAATGCCTTCATCTTTTTTGGAGGACTGGTTTTTAAGTTTGGCCGCACAGAAGACTTGTGGCAGTGA
ATGTCTGGATTTCTAGAAGGTATGAGATGCTCAGAATGCATTGATTGGGGGGAAAAACGAAATACTATTGCCTCTGTTGC
TGCCGGTGTTCTGTTTTTTACAGGCTGGTGGATCATCATAGATGCAGCTGTTATGTATCCCACTATGGAAGAGTTCAACC
ACTCGTACCATGCCTGTGGTGTGATAGCGACCATTGCCTTCCTCATGATTAATGCAGTATCGAATGGACAAGTCCGCGGT
GATAGCTACAGTGAAGGTTGTCTTGGTCAAACAGGTGCTCGCATCTGGCTGTTCCTGGGTTTCATGCTGGCCTTCGGCTC
TCTGATCACATCAATGTGGATTCTCTTTGGAGGTTATGTTGCTAAAGAAAAACCCATAGTGTATCCTGGAATCGCTGTGT
TTTTCCAGAATGCCTTCATCTTTTTTGGAGGACTGGTTTTTAAGTTTGGCCGCACAGAAGACTTGTGGCAGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000018575 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000012615 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007483 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000002060 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000032217 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000001182 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000001711 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000023740 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_1228 | 53.01 | 51.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1329 | 64.33 | 98.73 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000022246 retrocopies