Parental gene:

DKFZP459C1416, ENSPPYG00000001711

Aliases:None
Description:transmembrane protein 50A [Source:RefSeq peptide;Acc:NP_001127413]
Organism:Orangutan (Pongo abelii)
Coordinates:1:205059733..205085029(-)


>ENSPPYG00000001711
ATGTCTGGATTTCTAGAGGGCTTGAGATGCTCAGAATGCATTGACTGGGGGGAAAAGCGCAATACTATTGCTTCCATTGC
TGCTGGTGTACTATTTTTTACAGGCTGGTGGATTATCATAGATGCAGCTGTTATTTATCCCACCATGAAAGATTTCAACC
ACTCATACCATGCCTGTGGTGTTATAGCAACCATAGCCTTCCTAATGATTAATGCAGTATCGAATGGACAAGTCCGAGGT
GATAGTTACAGTGAAGGTTGTCTGGGTCAAACAGGTGCTCGCATTTGGCTTTTCATTGGTTTCATGTTGGCCTTTGGATC
TCTGATTGCATCTATGTGGATTCTTTTTGGAGGTTATGTTGCTAAAGAAAAAGACATAGTATACCCTGGAATTGCTGTAT
TTTTCCAGAATGCCTTCATCTTTTTTGGAGGGCTGGTTTTTAAGTTTGGCCGCACTGAAGACTTATGGCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 71 .27 RPM
SRP007412_cerebellum 65 .06 RPM
SRP007412_heart 27 .57 RPM
SRP007412_kidney 63 .84 RPM
SRP007412_liver 39 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018575 ortholog_one2one 1 retrogene
retro_cjac_1677,
Cavia porcellus ENSCPOG00000012615 ortholog_one2one 1 retrogene
retro_cpor_707,
Echinops telfairi ENSETEG00000007483 ortholog_one2one 1 retrogene
retro_etel_2061,
Macropus eugenii ENSMEUG00000002060 ortholog_one2one 1 retrogene
retro_meug_1270,
Macaca mulatta ENSMMUG00000032217 ortholog_one2one 1 retrogene
retro_mmul_1408,
Ochotona princeps ENSOPRG00000001182 ortholog_one2one 2 retrogenes
retro_opri_546, retro_opri_62,
Ictidomys tridecemlineatus ENSSTOG00000022246 ortholog_one2one 2 retrogenes
retro_itri_1228, retro_itri_1329,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1679 63.39 70.70
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Download FASTA sequences of all ENSPPYG00000001711 retrocopies