Parental gene:

ATP6V1G1, ENSSTOG00000015857

Aliases:None
Description:ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 [Source:HGNC Symbol;Acc:864]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393297.1:3801796..3809394(+)


>ENSSTOG00000015857
ATGGCCAGCCAGTCACAGGGGATCCAGCAGCTGCTGCAGGCGGAGAAGCGGGCCGCAGAGAAGGTGTCGGAGGCCCGCAA
GCGAAAGAATCGGAGGCTGAAGCAGGCCAAAGAAGAAGCTCAGGCTGAAATTGAACAGTACCGCCTGCAGAGGGAGAAAG
AGTTCAAGGCCAAGGAAGCTGCGGCACTGGGATCCCATGGCAGCTGCAGCACTGAAGTGGAGAAGGAGACCCAGGAAAAG
ATGACCATCCTGCAAACCTACTTCCGGCAGAACAGGGACGAAGTCTTGGATAATCTCTTGGCTTTTGTCTGCGACATCCG
ACCAGAAATCCATGAAAACTACCGCATAAATGGATAG

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020461 ortholog_one2many 3 retrogenes
retro_cjac_1788, retro_cjac_2513, retro_cjac_76,
Dasypus novemcinctus ENSDNOG00000008083 ortholog_one2one 15 retrogenes
retro_dnov_1173, retro_dnov_1447, retro_dnov_1475, retro_dnov_1504, retro_dnov_1588, retro_dnov_1645, retro_dnov_193, retro_dnov_1998, retro_dnov_2179, retro_dnov_218, retro_dnov_2416, retro_dnov_245, retro_dnov_336, retro_dnov_479, retro_dnov_790,
Dipodomys ordii ENSDORG00000014850 ortholog_one2one 5 retrogenes
retro_dord_434, retro_dord_466, retro_dord_614, retro_dord_640, retro_dord_749,
Echinops telfairi ENSETEG00000008080 ortholog_one2one 3 retrogenes
retro_etel_350, retro_etel_594, retro_etel_996,
Homo sapiens ENSG00000136888 ortholog_one2one 3 retrogenes
retro_hsap_3198, retro_hsap_4049, retro_hsap_763,
Gorilla gorilla ENSGGOG00000004011 ortholog_one2one 4 retrogenes
retro_ggor_1331, retro_ggor_2215, retro_ggor_2717, retro_ggor_632,
Loxodonta africana ENSLAFG00000013437 ortholog_one2one 2 retrogenes
retro_lafr_1002, retro_lafr_39,
Myotis lucifugus ENSMLUG00000008657 possible_ortholog 2 retrogenes
retro_mluc_373, retro_mluc_839,
Macaca mulatta ENSMMUG00000004899 ortholog_one2many 4 retrogenes
retro_mmul_1783, retro_mmul_2018, retro_mmul_2046, retro_mmul_331,
Monodelphis domestica ENSMODG00000019574 ortholog_one2one 1 retrogene
retro_mdom_1675,
Mus musculus ENSMUSG00000039105 possible_ortholog 5 retrogenes
retro_mmus_2028, retro_mmus_2784, retro_mmus_2787, retro_mmus_3316, retro_mmus_819,
Nomascus leucogenys ENSNLEG00000016833 ortholog_one2one 2 retrogenes
retro_nleu_1151, retro_nleu_3045,
Pan troglodytes ENSPTRG00000021290 ortholog_one2one 2 retrogenes
retro_ptro_2248, retro_ptro_2744,
Tupaia belangeri ENSTBEG00000010985 ortholog_one2one 2 retrogenes
retro_tbel_2147, retro_tbel_786,
Tarsius syrichta ENSTSYG00000011474 ortholog_one2one 3 retrogenes
retro_tsyr_1865, retro_tsyr_2141, retro_tsyr_614,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_1102 64.81 88.98
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2. retro_itri_1235 64.94 64.41
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3. retro_itri_1281 96.61 99.15
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4. retro_itri_1340 58.88 88.14
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5. retro_itri_1669 56.84 78.81
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Download FASTA sequences of all ENSSTOG00000015857 retrocopies