Parental gene: | SRSF3, ENSSTOG00000014280 |
| Aliases: | None |
| Description: | serine/arginine-rich splicing factor 3 [Source:HGNC Symbol;Acc:10785] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393286.1:22791558..22796408(-) |
>ENSSTOG00000014280
ATGCATCGTGATTCTTGTCCATTGGACTGTAAGGTTTATGTAGGTAATCTTGGAAACAATGGCAACAAGACTGAATTGGA
ACGGGCTTTTGGCTACTATGGACCACTCCGAAGTGTGTGGGTTGCTAGAAACCCTCCCGGCTTTGCTTTTGTTGAATTTG
AAGATCCCCGAGATGCAGCTGATGCTGTCCGAGAGCTAGATGGAAGAACACTTTGTGGCTGCCGTGTAAGAGTGGAACTC
TCGAATGGTGAAAAAAGAAGTCGAAATCGTGGCCCACCTCCGTCTTGGGGTCGTCGTCCTCGAGATGATTATCGTAGGAG
GAGTCCTCCACCTCGACGCAGATCTCCAAGAAGGAGAAGCTTCTCTCGCAGCCGGAGCAGGTCCCTTTCTAGAGATAGGA
GAAGAGAGAGATCACTGTCTCGGGAGAGAAATCACAAGCCGTCCCGATCCTTCTCTAGGTCTCGGAGCCGATCTAGGTCA
AATGAAAGGAAATAG
ATGCATCGTGATTCTTGTCCATTGGACTGTAAGGTTTATGTAGGTAATCTTGGAAACAATGGCAACAAGACTGAATTGGA
ACGGGCTTTTGGCTACTATGGACCACTCCGAAGTGTGTGGGTTGCTAGAAACCCTCCCGGCTTTGCTTTTGTTGAATTTG
AAGATCCCCGAGATGCAGCTGATGCTGTCCGAGAGCTAGATGGAAGAACACTTTGTGGCTGCCGTGTAAGAGTGGAACTC
TCGAATGGTGAAAAAAGAAGTCGAAATCGTGGCCCACCTCCGTCTTGGGGTCGTCGTCCTCGAGATGATTATCGTAGGAG
GAGTCCTCCACCTCGACGCAGATCTCCAAGAAGGAGAAGCTTCTCTCGCAGCCGGAGCAGGTCCCTTTCTAGAGATAGGA
GAAGAGAGAGATCACTGTCTCGGGAGAGAAATCACAAGCCGTCCCGATCCTTCTCTAGGTCTCGGAGCCGATCTAGGTCA
AATGAAAGGAAATAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000040006 | ortholog_one2one | 5 retrogenes | |
| Callithrix jacchus | ENSCJAG00000016062 | ortholog_one2many | 5 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000000421 | possible_ortholog | 9 retrogenes | |
| Equus caballus | ENSECAG00000018741 | possible_ortholog | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000010117 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000112081 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000017186 | possible_ortholog | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000018193 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000004674 | ortholog_one2one | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000010671 | ortholog_one2many | 6 retrogenes | |
| Macaca mulatta | ENSMMUG00000014306 | possible_ortholog | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000014215 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000071172 | ortholog_one2one | 9 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000006684 | possible_ortholog | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000000502 | possible_ortholog | 6 retrogenes | |
| Ochotona princeps | ENSOPRG00000006006 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000018106 | possible_ortholog | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000000520 | ortholog_one2one | 11 retrogenes | |
| Sus scrofa | ENSSSCG00000001564 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000013498 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000013447 | ortholog_one2one | 11 retrogenes | |
| Vicugna pacos | ENSVPAG00000005481 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_123 | 95.73 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_502 | 94.05 | 51.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_664 | 56.08 | 89.63 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_itri_857 | 89.02 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_itri_901 | 86.75 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000014280 retrocopies