Parental gene:

ENSSTOG00000013420

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393504.1:1536908..1542129(-)


>ENSSTOG00000013420
ATGTCCGAGACCAAGAACAGCCCCGAGTATGCTTCGTTCTTCGCGGTCATGGGCGCTTCGTCCGCCATGATCTTCAGCGC
CCTGGGTGCTGCCTATGGCACGGCCAAGAGTGGCACCGGCATCGCAGCCATGTCAGTCATGAGGCCGGAGCTGATCATGA
AGTCCATCATCCCAGTGGTCATGGCTGGGATCATCGCCATCTACGGCCTGGTGGTGGCAGTCCTCATCGCCAACTCCCTG
AATGATGGTATTAGCCTCTACAGGAGTTTCCTCCAGCTTGGTGCAGGCTTGAGTGTGGGCCTGAGTGGCCTGGCAGCTGG
CTTTGCCATTGGCATTGTGGGGGACGCCGGTGTTCGGGGCACTGCCCAGCAGCCCCGGCTGTTTGTGGGCATGATCCTGA
TCCTTATCTTCGCTGAGGTGCTTGGCCTCTACGGTCTCATCGTGGCCCTCATACTTTCAACAAAGTAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000026428 ortholog_one2many 1 retrogene
retro_btau_1638,
Homo sapiens ENSG00000185883 ortholog_one2many 2 retrogenes
retro_hsap_1798, retro_hsap_3462,
Gorilla gorilla ENSGGOG00000028600 ortholog_one2many 2 retrogenes
retro_ggor_1323, retro_ggor_2335,
Macropus eugenii ENSMEUG00000004597 ortholog_one2many 2 retrogenes
retro_meug_1428, retro_meug_1837,
Myotis lucifugus ENSMLUG00000026715 ortholog_many2many 2 retrogenes
retro_mluc_2507, retro_mluc_294,
Monodelphis domestica ENSMODG00000015439 ortholog_one2many 5 retrogenes
retro_mdom_1669, retro_mdom_1739, retro_mdom_507, retro_mdom_84, retro_mdom_982,
Mus musculus ENSMUSG00000024121 ortholog_one2many 2 retrogenes
retro_mmus_2726, retro_mmus_2888,
Nomascus leucogenys ENSNLEG00000009416 ortholog_one2many 2 retrogenes
retro_nleu_1692, retro_nleu_2770,
Procavia capensis ENSPCAG00000015060 ortholog_one2many 1 retrogene
retro_pcap_148,
Pan troglodytes ENSPTRG00000007653 ortholog_one2many 2 retrogenes
retro_ptro_1204, retro_ptro_2346,
Rattus norvegicus ENSRNOG00000006542 ortholog_many2many 1 retrogene
retro_rnor_118,
Sarcophilus harrisii ENSSHAG00000014251 ortholog_one2many 1 retrogene
retro_shar_194,
Drosophila melanogaster FBgn0262736 ortholog_many2many 3 retrogenes
retro_dmel_3, retro_dmel_38, retro_dmel_65,
Caenorhabditis elegans R10E11.2 ortholog_many2many 2 retrogenes
retro_cele_1, retro_cele_5,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_119 82.47 99.35
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2. retro_itri_387 81.13 100.00
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3. retro_itri_691 87.90 99.35
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Download FASTA sequences of all ENSSTOG00000013420 retrocopies