Parental gene:

Atp6v0c, ENSRNOG00000006542

Aliases:Atp6v0c, Atp6c, Atp6l
Description:V-type proton ATPase 16 kDa proteolipid subunit [Source:UniProtKB/Swiss-Prot;Acc:P63081]
Organism:Rat (Rattus norvegicus)
Coordinates:10:13352991..13358042(-)


>ENSRNOG00000006542
ATGGCTGACATCAAGAACAACCCCGAATATTCTTCGTTTTTCGGTGTCATGGGCGCCTCGTCCGCCATGGTCTTCAGCGC
CATGGGAGCTGCCTATGGCACAGCCAAGAGTGGCACTGGCATCGCAGCCATGTCGGTCATGAGGCCAGAGCTGATCATGA
AGTCCATCATCCCAGTGGTTATGGCTGGGATCATCGCCATCTACGGCCTGGTGGTTGCAGTACTTATCGCTAACTCCCTG
ACTGATGGCATCACCCTCTACAGGAGTTTTCTTCAACTGGGTGCTGGCCTGAGTGTGGGGCTGAGTGGCCTGGCTGCTGG
CTTTGCCATTGGCATTGTCGGAGATGCTGGTGTCCGGGGCACTGCCCAGCAGCCTCGACTGTTCGTGGGCATGATCCTGA
TCCTCATCTTTGCGGAGGTGCTTGGCCTCTACGGTCTCATCGTGGCCCTAATCCTCTCCACAAAGTAG

Library Parental gene expression (RPM)
SRP017611_liver 111 .01 RPM
SRP017611_kidney 376 .89 RPM
SRP017611_brain 511 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000026428 ortholog_one2many 1 retrogene
retro_btau_1638,
Homo sapiens ENSG00000185883 ortholog_one2many 2 retrogenes
retro_hsap_1798, retro_hsap_3462,
Gorilla gorilla ENSGGOG00000028600 ortholog_one2many 2 retrogenes
retro_ggor_1323, retro_ggor_2335,
Macropus eugenii ENSMEUG00000004597 ortholog_one2many 2 retrogenes
retro_meug_1428, retro_meug_1837,
Myotis lucifugus ENSMLUG00000026715 ortholog_many2many 2 retrogenes
retro_mluc_2507, retro_mluc_294,
Monodelphis domestica ENSMODG00000015439 ortholog_one2many 5 retrogenes
retro_mdom_1669, retro_mdom_1739, retro_mdom_507, retro_mdom_84, retro_mdom_982,
Mus musculus ENSMUSG00000024121 ortholog_one2many 2 retrogenes
retro_mmus_2726, retro_mmus_2888,
Nomascus leucogenys ENSNLEG00000009416 ortholog_one2many 2 retrogenes
retro_nleu_1692, retro_nleu_2770,
Procavia capensis ENSPCAG00000015060 ortholog_one2many 1 retrogene
retro_pcap_148,
Pan troglodytes ENSPTRG00000007653 ortholog_one2many 2 retrogenes
retro_ptro_1204, retro_ptro_2346,
Sarcophilus harrisii ENSSHAG00000014251 ortholog_one2many 1 retrogene
retro_shar_194,
Ictidomys tridecemlineatus ENSSTOG00000013420 ortholog_many2many 3 retrogenes
retro_itri_119, retro_itri_387, retro_itri_691,
Drosophila melanogaster FBgn0262736 ortholog_many2many 3 retrogenes
retro_dmel_3, retro_dmel_38, retro_dmel_65,
Caenorhabditis elegans R10E11.2 ortholog_many2many 2 retrogenes
retro_cele_1, retro_cele_5,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_118 88.14 76.13
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Download FASTA sequences of all ENSRNOG00000006542 retrocopies