Parental gene: | ENSSTOG00000003865 |
| Aliases: | None |
| Description: | None |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393364.1:4581470..4592204(+) |
>ENSSTOG00000003865
ATGGAGAACAATGAAAACTCAGTGGATTCAAAATCCATTAAAAATTTTGAACAAAAGACCATACATGGAAGCAAATCAAT
GGACTCTGGAATATCCTTGGACAATCGTTACAAAATGGATTATCCTGAAATGGGTTTATGTTTAATCATTAATAATAAGA
ACTTTCATAAAAGCACTGGAATGGCCTATCGGTCTGGTACAGATGTAGATGCAGCAAACCTCAGAGAAATATTCATGAAC
TTGAAATATGAAGTCAGGAATAAAAATGACCTTACACGTGAAGAAATTGTGGAGTTATTGCACAATGTTTCTAAAGAAGA
TCATAGCAAAAGGAGCAGCTTTGTTTGTATAATTCTAAGCCATGGTGATGAAGGAATAATATTTGGAACAAATGGACCTG
TTGACCTGAAAAAATTAACAAGTTTCTTCAGAGGAGATTATTGTAGAAGTCTAACTGGAAAACCCAAACTTTTCATTATT
CAGGCCTGCCGGGGTACAGAACTAGACTGTGGCATTGAGACAGACAGTGGCATTGATGATGACATGGCATGCCACAAAAT
ACCAGTAGAGGCCGACTTCTTATATGCATATTCTACAGCACCAGGTTACTATTCCTGGCGAAATTCCAAGGATGGATCCT
GGTTCATCCAGTCACTGTGTGCTCTGCTGAAACAATACGCTCATAAGCTTGAGTTTATGCATATTCTCACTCGGGTAAAC
CGGAAGGTAGCAACAGAATTTGAGTCCTTTTCTCTTGACTCCACTTTTCATGCAAAGAAACAGATTCCATGTATTGTGTC
CATGCTCACAAAAGAACTATATTTTTATCCCTAA
ATGGAGAACAATGAAAACTCAGTGGATTCAAAATCCATTAAAAATTTTGAACAAAAGACCATACATGGAAGCAAATCAAT
GGACTCTGGAATATCCTTGGACAATCGTTACAAAATGGATTATCCTGAAATGGGTTTATGTTTAATCATTAATAATAAGA
ACTTTCATAAAAGCACTGGAATGGCCTATCGGTCTGGTACAGATGTAGATGCAGCAAACCTCAGAGAAATATTCATGAAC
TTGAAATATGAAGTCAGGAATAAAAATGACCTTACACGTGAAGAAATTGTGGAGTTATTGCACAATGTTTCTAAAGAAGA
TCATAGCAAAAGGAGCAGCTTTGTTTGTATAATTCTAAGCCATGGTGATGAAGGAATAATATTTGGAACAAATGGACCTG
TTGACCTGAAAAAATTAACAAGTTTCTTCAGAGGAGATTATTGTAGAAGTCTAACTGGAAAACCCAAACTTTTCATTATT
CAGGCCTGCCGGGGTACAGAACTAGACTGTGGCATTGAGACAGACAGTGGCATTGATGATGACATGGCATGCCACAAAAT
ACCAGTAGAGGCCGACTTCTTATATGCATATTCTACAGCACCAGGTTACTATTCCTGGCGAAATTCCAAGGATGGATCCT
GGTTCATCCAGTCACTGTGTGCTCTGCTGAAACAATACGCTCATAAGCTTGAGTTTATGCATATTCTCACTCGGGTAAAC
CGGAAGGTAGCAACAGAATTTGAGTCCTTTTCTCTTGACTCCACTTTTCATGCAAAGAAACAGATTCCATGTATTGTGTC
CATGCTCACAAAAGAACTATATTTTTATCCCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000005740 | possible_ortholog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000012511 | ortholog_one2many | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000013931 | ortholog_many2many | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000002554 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000164305 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000025155 | possible_ortholog | 1 retrogene | |
| Microcebus murinus | ENSMICG00000004809 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000012053 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010895 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005985 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000015236 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000016640 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000010475 | ortholog_many2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000009178 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_172 | 89.89 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_586 | 95.34 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000003865 retrocopies