Parental gene:

FAM32A, ENSSSCG00000013855

Aliases:None
Description:family with sequence similarity 32, member A [Source:HGNC Symbol;Acc:24563]
Organism:Pig (Sus scrofa)
Coordinates:2:61020797..61026562(-)


>ENSSSCG00000013855
ATGGAAGACTACGAGCAAGTCCAAAGGGGGCCCCTGAAGCTGAAAGGTGTAGCAGAGCTCGGAGTGACCAAGCGGAAGAA
GAAAAAGAAGGACAAAGACAAGGCGAAACTCCTGGAAGCCATGGGAACGAGCAAAAAGAACGAAGAGGAGAAGCGGCGCG
GCCTGGACAAGCGGACCCCGGCCCAGGCGGCTTTCGAAAAGATGCAGGAGAAGCGGCAAATGGAAAGGATCCTGAAGAAA
GCATCCAAAACCCACAAGCAGAGAGTAGAGGACTTCAACAGACACCTGGATACTCTCACAGAGCACTATGACATTCCGAA
AGTCAGCTGGACGAAGTAG

Library Parental gene expression (RPM)
SRP014902_placenta 24 .29 RPM
SRP014902_testis 24 .89 RPM
SRP018856_adipose 90 .31 RPM
SRP018288_kidney 70 .63 RPM
SRP018288_lung 59 .98 RPM
SRP018288_liver 44 .61 RPM
SRP018288_heart 34 .94 RPM
SRP035408_liver 76 .47 RPM
SRP035408_brain 132 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000046846 ortholog_one2one 1 retrogene
retro_btau_312,
Callithrix jacchus ENSCJAG00000014097 ortholog_one2many 4 retrogenes
retro_cjac_15, retro_cjac_2459, retro_cjac_288, retro_cjac_979,
Homo sapiens ENSG00000105058 ortholog_one2one 4 retrogenes
retro_hsap_1116, retro_hsap_1950, retro_hsap_2541, retro_hsap_693,
Gorilla gorilla ENSGGOG00000022418 ortholog_one2one 4 retrogenes
retro_ggor_1420, retro_ggor_1587, retro_ggor_592, retro_ggor_872,
Loxodonta africana ENSLAFG00000009394 ortholog_one2one 1 retrogene
retro_lafr_654,
Microcebus murinus ENSMICG00000013721 ortholog_one2one 3 retrogenes
retro_mmur_1449, retro_mmur_252, retro_mmur_500,
Myotis lucifugus ENSMLUG00000000585 ortholog_one2many 2 retrogenes
retro_mluc_2147, retro_mluc_59,
Monodelphis domestica ENSMODG00000014904 ortholog_one2one 1 retrogene
retro_mdom_1401,
Mustela putorius furo ENSMPUG00000016048 ortholog_one2one 1 retrogene
retro_mputfur_1493,
Mus musculus ENSMUSG00000003039 ortholog_one2one 2 retrogenes
retro_mmus_1612, retro_mmus_3017,
Nomascus leucogenys ENSNLEG00000005441 ortholog_one2one 3 retrogenes
retro_nleu_192, retro_nleu_2227, retro_nleu_2790,
Otolemur garnettii ENSOGAG00000027763 ortholog_one2many 2 retrogenes
retro_ogar_3348, retro_ogar_949,
Pan troglodytes ENSPTRG00000010641 ortholog_one2one 4 retrogenes
retro_ptro_1304, retro_ptro_1480, retro_ptro_497, retro_ptro_684,
Rattus norvegicus ENSRNOG00000039528 ortholog_one2many 1 retrogene
retro_rnor_105,
Tarsius syrichta ENSTSYG00000009106 ortholog_one2one 1 retrogene
retro_tsyr_418,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_292 79.52 74.11
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2. retro_sscr_870 71.43 100.00
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Download FASTA sequences of all ENSSSCG00000013855 retrocopies