Parental gene: | FAM32A, ENSPTRG00000010641 |
| Aliases: | None |
| Description: | family with sequence similarity 32, member A [Source:HGNC Symbol;Acc:24563] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 19:16454007..16460914(+) |
>ENSPTRG00000010641
ATGGAGGCCTACGAGCAGGTCCAAAAGGGACCTCTGAAGCTGAAAGGCGTCGCAGAGCTGGGAGTGACCAAGCGGAAGAA
GAAAAAGAAGGACAAAGACAAAGCGAAACTCCTGGAAGCAATGGGAACGAGCAAAAAGAACGAGGAGGAGAAGCGGCGCG
GCCTGGACAAGCGGACCCCGGCCCAGGCGGCCTTCGAGAAAATGCAGGAGAAGCGGCAAATGGAAAGGATCCTAAAGAAG
GCATCCAAAACCCACAAGCAGAGAGTGGAGGACTTCAACAGACACCTGGACACACTCACGGAGCATTACGACATTCCCAA
AGTCAGCTGGACGAAGTAG
ATGGAGGCCTACGAGCAGGTCCAAAAGGGACCTCTGAAGCTGAAAGGCGTCGCAGAGCTGGGAGTGACCAAGCGGAAGAA
GAAAAAGAAGGACAAAGACAAAGCGAAACTCCTGGAAGCAATGGGAACGAGCAAAAAGAACGAGGAGGAGAAGCGGCGCG
GCCTGGACAAGCGGACCCCGGCCCAGGCGGCCTTCGAGAAAATGCAGGAGAAGCGGCAAATGGAAAGGATCCTAAAGAAG
GCATCCAAAACCCACAAGCAGAGAGTGGAGGACTTCAACAGACACCTGGACACACTCACGGAGCATTACGACATTCCCAA
AGTCAGCTGGACGAAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 49 .30 RPM |
| SRP007412_cerebellum | 41 .48 RPM |
| SRP007412_heart | 22 .33 RPM |
| SRP007412_kidney | 73 .12 RPM |
| SRP007412_liver | 56 .99 RPM |
| SRP007412_testis | 18 .23 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000046846 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000014097 | ortholog_one2many | 4 retrogenes | |
| Homo sapiens | ENSG00000105058 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000022418 | ortholog_one2one | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000009394 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000013721 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000000585 | ortholog_one2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000014904 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000016048 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000003039 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005441 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000027763 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000039528 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000013855 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000009106 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_497 | 72.97 | 98.21 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_684 | 71.11 | 79.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1304 | 57.50 | 71.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_1480 | 83.13 | 73.21 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000010641 retrocopies