Parental gene:

CCNC, ENSSSCG00000004353

Aliases:None
Description:cyclin C [Source:HGNC Symbol;Acc:1581]
Organism:Pig (Sus scrofa)
Coordinates:1:75149763..75175355(-)


>ENSSSCG00000004353
ATGGCAGGGAACTTTTGGCAGAGCTCCCATTATTTGCAATGGATTTTGGATAAACAAGATCTGTTGAAGGAACGCCAAAA
GGACTTAAAGTTTCTCTCAGAAGAAGAGTATTGGAAATTACAGATATTTTTTACAAATGTTATCCAAGCATTAGGTGAAC
ATCTTAAATTAAGACAACAAGTTATTGCCACTGCTACGGTCTATTTCAAGAGATTCTATGCCAGGTATTCTCTGAAAAGT
ATAGATCCTGTATTAATGGCTCCTACATGTGTGTTTTTGGCATCCAAAGTAGAGGAATTTGGAGTGGTCTCAAATACAAG
ATTGATTTCTGCTGCTACTTCGGTGAGTAAAACTAGATTTTCATATGCCTTTCCAAGGTTTCCTTATAGGATGAACCATA
TATTAGAATGTGAATTCTATCTTTTAGAATTAATGGATTGTTGCTTGATAGTGTATCATCCTTATAGACCTTTGCTCCAG
TATGTGCAGGACATGGGCCAAGAAGACATGTTGCTGCCCCTTGCATGGAGGATAGTGAATGATACCTACAGGACGGATCT
TTGCCTACTGTATCCTCCTTTCATGATAGCTTTAGCCTGCCTGCATGTAGCCTGTGTTGTACAGCAGAAAGATGCCAGAC
AGTGGTTTGCTGAGCTTTCTGTGGACATGGAGAAGATTTTGGAAATAATCAGGGTTATTTTAAAACTGTATGAGCAGTGG
AAGAATTTTGATGAGAGGAAAGAGATGGCAACTATCCTTAGTAAGATGCCGAAACCAAAACCTCCTCCAAACAGTGAAGG
AGAGCAGGGTCCAAATGGAAGTCAGAACTCTAGCTACAGCCAATCTTAA

Library Parental gene expression (RPM)
SRP014902_placenta 5 .04 RPM
SRP014902_testis 11 .46 RPM
SRP018856_adipose 12 .56 RPM
SRP018288_kidney 57 .63 RPM
SRP018288_lung 28 .51 RPM
SRP018288_liver 46 .53 RPM
SRP018288_heart 17 .71 RPM
SRP035408_liver 38 .16 RPM
SRP035408_brain 25 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008954 ortholog_one2one 1 retrogene
retro_amel_1828,
Canis familiaris ENSCAFG00000003525 ortholog_one2one 1 retrogene
retro_cfam_1774,
Dasypus novemcinctus ENSDNOG00000011999 ortholog_one2many 3 retrogenes
retro_dnov_1153, retro_dnov_216, retro_dnov_2243,
Dipodomys ordii ENSDORG00000008393 ortholog_one2one 2 retrogenes
retro_dord_230, retro_dord_75,
Myotis lucifugus ENSMLUG00000012815 ortholog_one2one 1 retrogene
retro_mluc_1582,
Oryctolagus cuniculus ENSOCUG00000003309 ortholog_one2one 2 retrogenes
retro_ocun_1753, retro_ocun_888,
Ochotona princeps ENSOPRG00000012972 ortholog_one2one 2 retrogenes
retro_opri_1026, retro_opri_151,
Tupaia belangeri ENSTBEG00000017525 ortholog_one2one 1 retrogene
retro_tbel_677,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_760 82.42 58.16
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Download FASTA sequences of all ENSSSCG00000004353 retrocopies