Parental gene: | CCNC, ENSOPRG00000012972 |
| Aliases: | None |
| Description: | cyclin C [Source:HGNC Symbol;Acc:1581] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_1244:118493..240790(-) |
>ENSOPRG00000012972
ATGGTCGCTCCGCCGCTCCGCCGGCTGGTGCTTTCTTATCAGGACAAGCTGTATTCGATGGCAGGGAACTTTTGGCAGAG
CTCCCACTATTTGCAGTGGATTTTGGATAAGCAAGATCTGTTGAAGGAACGCCAAAAGGACTTAAAGTTTCTCTCAGAAG
AAGAGTATTGGAAATTACAAATATTTTTTACAAATGTTATCCAAGCATTAGGGGAACATCTTAAATTAAGACAACAAGTT
ATTGCCACTGCTACGGTCTATTTCAAGAGATTCTATGCCAGGTATTCTCTGAAAAGTATAGATCCTGTACTAATGGCTCC
TACATGTGTGTTTTTGGCATCCAAAGTAGAGGAATTTGGAGTAGTCTCAAATACAAGGTTGATTGCTGCTGCTACTTCTG
TATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATTAGAATGTGAATTCTAT
CTTTTAGAACTAATGGATTGTTGCCTGATAGTGTATCATCCTTATTTGCTCCAGTATNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGAGGATAGTGAATGATACCTACAGAACGGATCTTTGTCTACTGTATCCTCCTTTCATGA
TAGCTTTAGCTTGCCTCCATGTAGCCTGTGTTGTGCAGCAAAAAGATGCCAGACAGTGGTTTGCTGAACTCTCTGTGGAT
ATGGAAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAGGAGAGCAGGGTCCAAATGGAAGTCAGA
ACTCTAGCTACAGCCAATCTTAA
ATGGTCGCTCCGCCGCTCCGCCGGCTGGTGCTTTCTTATCAGGACAAGCTGTATTCGATGGCAGGGAACTTTTGGCAGAG
CTCCCACTATTTGCAGTGGATTTTGGATAAGCAAGATCTGTTGAAGGAACGCCAAAAGGACTTAAAGTTTCTCTCAGAAG
AAGAGTATTGGAAATTACAAATATTTTTTACAAATGTTATCCAAGCATTAGGGGAACATCTTAAATTAAGACAACAAGTT
ATTGCCACTGCTACGGTCTATTTCAAGAGATTCTATGCCAGGTATTCTCTGAAAAGTATAGATCCTGTACTAATGGCTCC
TACATGTGTGTTTTTGGCATCCAAAGTAGAGGAATTTGGAGTAGTCTCAAATACAAGGTTGATTGCTGCTGCTACTTCTG
TATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATTAGAATGTGAATTCTAT
CTTTTAGAACTAATGGATTGTTGCCTGATAGTGTATCATCCTTATTTGCTCCAGTATNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGAGGATAGTGAATGATACCTACAGAACGGATCTTTGTCTACTGTATCCTCCTTTCATGA
TAGCTTTAGCTTGCCTCCATGTAGCCTGTGTTGTGCAGCAAAAAGATGCCAGACAGTGGTTTGCTGAACTCTCTGTGGAT
ATGGAAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAGGAGAGCAGGGTCCAAATGGAAGTCAGA
ACTCTAGCTACAGCCAATCTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008954 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000003525 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000011999 | ortholog_one2many | 3 retrogenes | |
| Dipodomys ordii | ENSDORG00000008393 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000012815 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000003309 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000004353 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000017525 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_151 | 57.06 | 55.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_1026 | 57.06 | 55.67 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000012972 retrocopies