Parental gene: | ENSDNOG00000011999 |
| Aliases: | None |
| Description: | None |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_1880:110266..130927(-) |
>ENSDNOG00000011999
ATGGTCGCTCCGCCGCTCCGCCGGCTGGTATTTTATCAGGGCCTGTGTATGAACTTTTGGCAGAGCTCCCACTATTTGCA
ATGGATTTTGGATAAACAAGATCTGTTGAAGGAGCGCCAAAAGGACTTAAAGTTTCTCTCAGAAGAAGAATATTGGAAAT
TACAAATATTTTTTACAAATGTTATCCAAGCACTAGGTGAACATCTTAAATTAAGACAACAAGTTATTGCCACAGCTACA
GTCTATTTCAAGAGATTCTATGCGAGGTATTCTCTGAAAAGTATCGATCCTGTACTAATGGCTCCTACATGTGTGTTTTT
GGCATCCAAAGTAGAGGAATTTGGAGTAGTTTCAAATACAAGACTGACTGCTGCTGCTACTTCTGTATTAAAAACTAGAT
TTTCATATGCCTTTCCAAAGGAATTTCCTTATAGGATGAACCATATATTAGAATGTGAATTCTATCTTTTAGAACTAATG
GATTGTTGCTTGATAGTGTATCATCCTTATAGACCTTTGCTCCAGTATGTGCAGGACATGGGCCAAGAAGACATGTTGCT
TCCCCTTGCATGGAGGATAGTGAATGATACCTACAGAACGGATCTTTGCCTACTATATCCTCCTTTCATGATAGCTTTAG
CTTGCCTCCATGTAGCCTGTGTTGTACAGCAGAAAGATGCCAGACAATGGTTTGCTGAGCTTTCTGTGGATATGGAGAAG
ATGGTCGCTCCGCCGCTCCGCCGGCTGGTATTTTATCAGGGCCTGTGTATGAACTTTTGGCAGAGCTCCCACTATTTGCA
ATGGATTTTGGATAAACAAGATCTGTTGAAGGAGCGCCAAAAGGACTTAAAGTTTCTCTCAGAAGAAGAATATTGGAAAT
TACAAATATTTTTTACAAATGTTATCCAAGCACTAGGTGAACATCTTAAATTAAGACAACAAGTTATTGCCACAGCTACA
GTCTATTTCAAGAGATTCTATGCGAGGTATTCTCTGAAAAGTATCGATCCTGTACTAATGGCTCCTACATGTGTGTTTTT
GGCATCCAAAGTAGAGGAATTTGGAGTAGTTTCAAATACAAGACTGACTGCTGCTGCTACTTCTGTATTAAAAACTAGAT
TTTCATATGCCTTTCCAAAGGAATTTCCTTATAGGATGAACCATATATTAGAATGTGAATTCTATCTTTTAGAACTAATG
GATTGTTGCTTGATAGTGTATCATCCTTATAGACCTTTGCTCCAGTATGTGCAGGACATGGGCCAAGAAGACATGTTGCT
TCCCCTTGCATGGAGGATAGTGAATGATACCTACAGAACGGATCTTTGCCTACTATATCCTCCTTTCATGATAGCTTTAG
CTTGCCTCCATGTAGCCTGTGTTGTACAGCAGAAAGATGCCAGACAATGGTTTGCTGAGCTTTCTGTGGATATGGAGAAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 11 .67 RPM |
| SRP012922_cerebellum | 9 .21 RPM |
| SRP012922_heart | 4 .18 RPM |
| SRP012922_kidney | 5 .75 RPM |
| SRP012922_liver | 3 .41 RPM |
| SRP012922_lung | 7 .64 RPM |
| SRP012922_quadricep_muscle | 5 .19 RPM |
| SRP012922_spleen | 12 .25 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008954 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000015744 | possible_ortholog | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000003525 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000001388 | possible_ortholog | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000008393 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000002643 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012815 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000003309 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000001116 | possible_ortholog | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000012972 | ortholog_one2many | 2 retrogenes | |
| Sorex araneus | ENSSARG00000004726 | possible_ortholog | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000004353 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000017525 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_216 | 80.11 | 75.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1153 | 78.82 | 69.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_2243 | 89.05 | 87.50 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000011999 retrocopies