Parental gene:

ENSSSCG00000002907

Aliases:None
Description:Sus scrofa COX6B protein (COX6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001097497]
Organism:Pig (Sus scrofa)
Coordinates:6:40548762..40559160(+)


>ENSSSCG00000002907
ATGGCAGAAGACATCCAGACCAAAATCAAGAACTACCAGACAGCTCCTTTTGACAGCCGCTTCCCCAACCAGAACCAGAC
CAGGAACTGCTGGCAGAACTACCTGGACTTCCACCGCTGTGAGAAAGCAATGACTGCTAAAGGGGGTGACGTCTCCGTGT
GCGAATGGTACCGGCGTGTGTACAAGTCTCTCTGCCCCATATCCTGGGTGTCAGCCTGGGATGACCGCCGGGCGGAAGGC
ACGTTTCCTGGGAAGATCTGA

Library Parental gene expression (RPM)
SRP014902_placenta 103 .80 RPM
SRP014902_testis 44 .70 RPM
SRP018856_adipose 114 .89 RPM
SRP018288_kidney 178 .49 RPM
SRP018288_lung 42 .87 RPM
SRP018288_liver 79 .48 RPM
SRP018288_heart 328 .70 RPM
SRP035408_liver 130 .75 RPM
SRP035408_brain 194 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000563 ortholog_one2many 3 retrogenes
retro_amel_1653, retro_amel_581, retro_amel_775,
Canis familiaris ENSCAFG00000006913 ortholog_many2many 7 retrogenes
retro_cfam_1614, retro_cfam_1760, retro_cfam_517, retro_cfam_6, retro_cfam_775, retro_cfam_830, retro_cfam_929,
Callithrix jacchus ENSCJAG00000010211 ortholog_many2many 5 retrogenes
retro_cjac_1513, retro_cjac_2007, retro_cjac_268, retro_cjac_2870, retro_cjac_2924,
Equus caballus ENSECAG00000012317 ortholog_one2many 3 retrogenes
retro_ecab_1051, retro_ecab_190, retro_ecab_719,
Felis catus ENSFCAG00000006378 ortholog_many2many 5 retrogenes
retro_fcat_107, retro_fcat_2017, retro_fcat_293, retro_fcat_758, retro_fcat_783,
Homo sapiens ENSG00000126267 ortholog_one2many 5 retrogenes
retro_hsap_1762, retro_hsap_2906, retro_hsap_3807, retro_hsap_4032, retro_hsap_4089,
Microcebus murinus ENSMICG00000009902 ortholog_one2many 5 retrogenes
retro_mmur_1099, retro_mmur_1413, retro_mmur_1588, retro_mmur_77, retro_mmur_809,
Myotis lucifugus ENSMLUG00000011365 ortholog_many2many 4 retrogenes
retro_mluc_2244, retro_mluc_2455, retro_mluc_55, retro_mluc_933,
Macaca mulatta ENSMMUG00000016765 ortholog_many2many 5 retrogenes
retro_mmul_1212, retro_mmul_1227, retro_mmul_1655, retro_mmul_1989, retro_mmul_2327,
Monodelphis domestica ENSMODG00000013962 ortholog_one2many 1 retrogene
retro_mdom_1046,
Mustela putorius furo ENSMPUG00000006258 ortholog_many2many 1 retrogene
retro_mputfur_998,
Mus musculus ENSMUSG00000036751 ortholog_one2many 1 retrogene
retro_mmus_2498,
Nomascus leucogenys ENSNLEG00000011283 ortholog_one2many 5 retrogenes
retro_nleu_1914, retro_nleu_2396, retro_nleu_2829, retro_nleu_2845, retro_nleu_978,
Oryctolagus cuniculus ENSOCUG00000009606 ortholog_one2many 2 retrogenes
retro_ocun_1797, retro_ocun_840,
Otolemur garnettii ENSOGAG00000004148 ortholog_one2many 4 retrogenes
retro_ogar_1903, retro_ogar_3033, retro_ogar_3447, retro_ogar_553,
Oryzias latipes ENSORLG00000006070 possible_ortholog 1 retrogene
retro_olat_4,
Pan troglodytes ENSPTRG00000010854 ortholog_one2many 4 retrogenes
retro_ptro_1209, retro_ptro_1964, retro_ptro_2583, retro_ptro_2733,
Pteropus vampyrus ENSPVAG00000012821 ortholog_one2many 8 retrogenes
retro_pvam_1031, retro_pvam_1044, retro_pvam_1331, retro_pvam_303, retro_pvam_336, retro_pvam_576, retro_pvam_717, retro_pvam_757,
Rattus norvegicus ENSRNOG00000024309 ortholog_many2many 1 retrogene
retro_rnor_201,
Sorex araneus ENSSARG00000010771 ortholog_one2many 1 retrogene
retro_sara_51,
Tarsius syrichta ENSTSYG00000014563 ortholog_one2many 8 retrogenes
retro_tsyr_1179, retro_tsyr_1257, retro_tsyr_1260, retro_tsyr_1897, retro_tsyr_44, retro_tsyr_486, retro_tsyr_78, retro_tsyr_80,
Tursiops truncatus ENSTTRG00000002241 ortholog_one2many 2 retrogenes
retro_ttru_619, retro_ttru_94,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_89 84.88 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_sscr_780 56.32 97.67
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSSCG00000002907 retrocopies