Parental gene:

SF3A3, ENSSARG00000014204

Aliases:None
Description:splicing factor 3a, subunit 3, 60kDa [Source:HGNC Symbol;Acc:10767]
Organism:Shrew (Sorex araneus)
Coordinates:GeneScaffold_2170:410103..459078(-)


>ENSSARG00000014204
ATGGAGACCATCCTGGAGCAGCAGCGGCGGTACCATGAGGAGAAGGAACGCCTCATGGACGTCATGGCCAAAGAGATGCT
CACCAAGAAGTCCACGCTCCGCGACCAGATCAACTCTGACCACCGCACCCGGGCCATGCAAGATAGGTACATGGAAGTCA
GTGGGAACCTCAGGGATTTGTATGACGATAAGGATGGAAGGGAGAAACTCGTCGTTCCGGGACCCAATGAATTTGCTGAA
TCTCACAACAGAATCACGCAAAAAAAGAAATTCCCCAGAGGAAAACACCCAAATGGAATCTGTGTGCCAATGTCAGTGGA
ATTTGAAGAACTCCTGAAGGCTCGAGAGAATCCAAGTGAAGAGGCGCAGAACTTGGTGGAGTTCACGGATGAAGAGGGGT
ATGGCCGTTACCTTGATCTCCATGACTGTTACCTCAAGTACATTAACTTGAAGGCCTCTGAGAAGCTGGATTATATCACA
TACTTGTCTATCTTTGACCAGTTATTTGACATTCCTAAAGAAAGAAAGAATGCAGAGTACAAGCGGTACCTGGAGATGTT
ACTTGAGTACCTTCAGGATTACACAGACAGAGTGAAGCCCTTACAAGACCAGAATGAACTTTTTGGAAAGATTCAGACTG
AGTTTGAGAAGAAGTGGGACAATGGCACCTTTCCTGGATGGCCAAAAGAGACTAGCAGTGCCCTGACCCATGCTGGAGCT
CATCTTGACCTCTCTGCGTTCTCCTCCTGGGAGGAATTGGCCTCCCTGGGTTTGGACAGATTGAAATCTGCTCTCTTAGC
TTTAGGCCTAAAGTGTGGCGGGACTCTAGAAGAGCGAGCCCAGAGATTGTTCAGCACCAAAGGAAAGTCTCTGGAATCAC
TTGACACCTCTCTCTTTGCCAAGAACCCCAAGTCAAAGGGCACCAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCAGCGACATCTCACCCATGAAAATGTGCAGCGCAAACA
GGCCAGGACAGGAGAAGAGCGAGAAGAGGAGGAGGAGGAGCAGATCAGTGAGAGTGAGAGTGAGGACGAAGAGAATGAGA
TTATTTACAACCCGAAGAACCTGCCCCTTGGCTGGGACGGAAAGCCCATTCCCTACTGGCTGTATAAGCTGCACGGCCTG
AATATCAACTACAACTGTGAGATCTGTGGAAACTATACCTACCGAGGGCCCAAGGCCTTTCAGCGGCACTTTGCTGAATG
GCGCCATGCTCATGGCATGAGGTGTCTGGGCATCCCCAACACTGCCCACTTTGCTAATGTGACACAGATCGAAGATGCCG
TCTCCTTGTGGGCCAAGCTGAAACTCCAGAAGGCATCGGAACGATGGCAGCCTGACACAGAGGAAGAGTACGAAGACTCC
AGTGGGAATGTTGTGAATAAGAAGACATATGAGGATCTGAAAAGACAAGGACTGCTCTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001262 ortholog_one2one 1 retrogene
retro_amel_485,
Canis familiaris ENSCAFG00000003222 ortholog_one2many 1 retrogene
retro_cfam_176,
Callithrix jacchus ENSCJAG00000002176 ortholog_one2one 1 retrogene
retro_cjac_4109,
Cavia porcellus ENSCPOG00000008660 ortholog_one2one 1 retrogene
retro_cpor_658,
Homo sapiens ENSG00000183431 ortholog_one2one 2 retrogenes
retro_hsap_2441, retro_hsap_937,
Macropus eugenii ENSMEUG00000002534 ortholog_one2one 3 retrogenes
retro_meug_1135, retro_meug_1346, retro_meug_642,
Macaca mulatta ENSMMUG00000023199 ortholog_one2one 1 retrogene
retro_mmul_631,
Monodelphis domestica ENSMODG00000017729 ortholog_one2many 1 retrogene
retro_mdom_269,
Nomascus leucogenys ENSNLEG00000011720 ortholog_one2one 1 retrogene
retro_nleu_2775,
Pan troglodytes ENSPTRG00000000559 ortholog_one2one 2 retrogenes
retro_ptro_1411, retro_ptro_649,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sara_407 60.97 53.11
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Download FASTA sequences of all ENSSARG00000014204 retrocopies