Parental gene:

ENSMODG00000017729

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:4:421634208..421651821(-)


>ENSMODG00000017729
ATGGAGACGATTTTAGAGCAGCAGCGGCGCTACCATGAAGAAAAGGAGCGACTCATGGACGTTATGGCCAAGGAAATGCT
CATTAAGAAGTCCACGCTCCGGGACCAGATCAATTCGGACCATCGCACGCGGGCTATGCAGGACAGGTATATGGAAGTCA
GTGGGAACCTGAGAGATTTATATGATGACAAGGATGGATTAAGAAAGGAGGAGCTCAGTGCTATTTCAGGACCAAATGAA
TTTGCAGAATTCTATAATAGACTCAAACAGATAAAAGAATTCCATCGGAAGCACCCAAATGAGATTTGTGTGCCAATGTC
AGTGGAATTTGAGGAGCTCCTGAAAGCCAGAGAAAATCCTAGTGAAGAAGCACAAAACTTGGTGGAATTCACTGATGAAG
AAGGATATGGCCGTTATCTGGATCTTCATGACTGTTACCTTAAGTACATCAACCTAAAAGCATCTGAGAAACTGGATTAT
ATCACATATCTGTCCATCTTTGATCAGTTATTTGATATTCCAAAGGAAAGGAAGAATGCAGAGTACAAGAGGTACCTGGA
GATGCTGCTTGAGTACCTCCAAGACTACACAGATAGGGTGAAGCCCCTGCAAGACCAGAATGAGCTGTTTGGGAAGATTC
AGAATGAATTTGAGAAGAAGTGGGACAATGGTACCTTTCCAGGCTGGCCGAAAGAGACAAGTAGTGCATTGACCCATGCT
GGAGCCCACCTTGACCTCTCTGCATTTTCTTCCTGGGAGGAGTTGGCCTCCTTGGGTCTGGACAGACTGAAATCTGCACT
CTTGGCTTTAGGACTGAAATGTGGCGGGACACTGGAAGAGCGAGCCCAGAGACTATTCAGCACTAAAGGCAAGTCCCTGG
AATCACTTGACTCCTCTCTGTTTGCTAAGAATCCCAAATCAAAGGGAACCAAGAGGGACACTGAGAGGAATAAAGACATT
GCTTTCCTTGAAGCCCAGATTTATGAATATGTTGAGATTCTTGGGGTAAAAAGAAGGAGACTTACTGATGTCAAAAGGTT
CTTCTATTTGGACAACCTCAGGTTCTCTACAGTCCACATGAGCACAAGCAGAGTTGCCAGTCTACCTAACAATTTGGTTG
CTAGAACTTGCTCTGATCTTCAGGAGAATGAGCTACCCTTCTTCATTTCTCTTTCTTTTCCCTTGGCTTTTCTGCCTTCT
CAGTACCCATACTTTATGCTTGCCTTGGAGCATTTCATAGCATCAATGCCATTAAAGACCAAAAAAGATATTACCTCTGA
CCTTCAGGAATGGCGCCATGCTCATGGCATGAGATGCTTGGGCATTCCAAATACAGCTCATTTTGCTAATGTGACCCAGA
TAGAAGATGCTGTCTCTTCTGTGTTTCACTCACTCACCCTGAGATTTCCCAGAAGTGACCTGAGGCCATTTCCAAACATA
ACAAATGAGGAGTATGAGGATTCCAGTGGAAATGTTGTGAATAAGAAGACATATGAGGACTTGAAACGCCAGGGACTGCT
TTAG

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001262 ortholog_one2many 1 retrogene
retro_amel_485,
Canis familiaris ENSCAFG00000003222 ortholog_many2many 1 retrogene
retro_cfam_176,
Callithrix jacchus ENSCJAG00000002176 ortholog_one2many 1 retrogene
retro_cjac_4109,
Cavia porcellus ENSCPOG00000008660 ortholog_one2many 1 retrogene
retro_cpor_658,
Homo sapiens ENSG00000183431 ortholog_one2many 2 retrogenes
retro_hsap_2441, retro_hsap_937,
Macropus eugenii ENSMEUG00000002534 ortholog_one2many 3 retrogenes
retro_meug_1135, retro_meug_1346, retro_meug_642,
Macaca mulatta ENSMMUG00000023199 ortholog_one2many 1 retrogene
retro_mmul_631,
Monodelphis domestica ENSMODG00000005979 within_species_paralog 1 retrogene
retro_mdom_1045,
Nomascus leucogenys ENSNLEG00000011720 ortholog_one2many 1 retrogene
retro_nleu_2775,
Pan troglodytes ENSPTRG00000000559 ortholog_one2many 2 retrogenes
retro_ptro_1411, retro_ptro_649,
Sorex araneus ENSSARG00000014204 ortholog_one2many 1 retrogene
retro_sara_407,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_269 92.90 66.67
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Download FASTA sequences of all ENSMODG00000017729 retrocopies