Parental gene:

SF3A3, ENSAMEG00000001262

Aliases:None
Description:splicing factor 3a, subunit 3, 60kDa [Source:HGNC Symbol;Acc:10767]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL193080.1:468822..490569(-)


>ENSAMEG00000001262
ATGGAGACAATTCTGGAGCAGCAGCGGCGATATCATGAGGAAAAGGAACGGCTCATGGACGTCATGGCCAAAGAGATGCT
CACTAAGAAGTCCACGCTCCGGGACCAGATCAATTCTGACCACCGCACACGGGCCATGCAAGATAGGTATATGGAAGTCA
GTGGGAACCTGCGGGATTTGTACGATGATAAGGATGGGTTACGAAAAGAGGAACTCAATGCAATTTCAGGACCCAATGAA
TTTGCTGAGTTTTATAATAGACTCAAGCAAATAAAGGAATTCCATCGGAAACACCCAAATGAGATCTGTGTGCCGATGTC
AGTGGAATTTGAGGAGCTTCTGAAGGCTCGAGAGAATCCAAGTGAAGAGGCACAAAACTTGGTCGAATTCACAGATGAAG
AGGGATATGGTCGTTACCTCGACCTTCATGACTGTTACCTCAAATACATTAACCTGAAGGCCTCAGAGAAGCTGGATTAT
ATCACATATCTCTCCATCTTTGACCAGTTATTTGACATTCCTAAAGAAAGGAAGAATGCTGAATATAAGAGATACCTGGA
GATGCTGCTTGAGTACCTTCAAGATTACACAGATCGAGTGAAGCCCCTCCAAGATCAGAATGAACTTTTTGGGAAGATTC
AGAATGAATTTGAGAAGAAGTGGGAGAATGGTACCTTTCCTGGATGGCCGAAAGAGACAAGCAGTGCCCTGACTCATGCT
GGAGCCCATCTTGACCTTTCTGCATTCTCCTCCTGGGAGGAGTTGGCCTCCCTGGGTCTGGACAGATTGAAATCTGCACT
CTTAGCTTTAGGATTGAAGTGTGGTGGGACCCTAGAAGAGCGAGCCCAGAGGCTCTTCAGCACCAAAGGAAAGTCCCTGG
AGTCACTTGACACCTCCCTGTTTGCCAAAAATCCCAAGTCTAAAGGCACCAAGCGAGACACTGAGAGGAACAAAGACATT
GCCTTCCTAGAAGCCCAGATCTATGAATATGTAGAGATTCTTGGGGAACAGCGACATCTCACTCATGAAAATGTACAACG
TAAGCAGGCAAGGACCGGGGAGGAGCGAGAAGAAGAAGAGGAAGAGCAGATCAGTGAGAGTGAAAGTGAAGATGAAGAGA
ATGAGATCATTTACAACCCCAAGAACCTGCCCCTCGGCTGGGATGGCAAACCTATTCCCTACTGGCTGTATAAGCTTCAT
GGTCTAAACATCAACTATAACTGTGAGATTTGTGGAAATTACACCTACCGAGGTCCCAAGGCATTCCAGCGGCACTTTGC
TGAGTGGCGTCATGCCCATGGCATGAGGTGTTTAGGCATCCCGAACACTGCCCACTTTGCTAATGTGACCCAGATTGAAG
ATGCTGTCTCCTTGTGGGCCAAGCTGAAACTGCAGAAGGCATCAGAACGATGGCAGCCTGACACCGAGGAAGAATATGAA
GACTCCAGTGGGAATGTTGTGAATAAGAAGACCTATGAGGATCTGAAAAGACAAGGACTGCTCTAG

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003222 ortholog_one2many 1 retrogene
retro_cfam_176,
Callithrix jacchus ENSCJAG00000002176 ortholog_one2one 1 retrogene
retro_cjac_4109,
Cavia porcellus ENSCPOG00000008660 ortholog_one2one 1 retrogene
retro_cpor_658,
Homo sapiens ENSG00000183431 ortholog_one2one 2 retrogenes
retro_hsap_2441, retro_hsap_937,
Macropus eugenii ENSMEUG00000002534 ortholog_one2one 3 retrogenes
retro_meug_1135, retro_meug_1346, retro_meug_642,
Macaca mulatta ENSMMUG00000023199 ortholog_one2one 1 retrogene
retro_mmul_631,
Monodelphis domestica ENSMODG00000017729 ortholog_one2many 1 retrogene
retro_mdom_269,
Nomascus leucogenys ENSNLEG00000011720 ortholog_one2one 1 retrogene
retro_nleu_2775,
Pan troglodytes ENSPTRG00000000559 ortholog_one2one 2 retrogenes
retro_ptro_1411, retro_ptro_649,
Sorex araneus ENSSARG00000014204 ortholog_one2one 1 retrogene
retro_sara_407,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_485 71.64 65.67
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Download FASTA sequences of all ENSAMEG00000001262 retrocopies