Parental gene: | Mphosph6, ENSRNOG00000050087 |
| Aliases: | None |
| Description: | None |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 19:61135817..61145641(-) |
>ENSRNOG00000050087
ATGGCGTCGGAGCGGAAGACTAAGTTATCCAAGAACTTGCTGCGCATGAAGTTCATGCAGAGGGGCCTGGACTCGGAAAC
CAAGAAACAGCTAGAAGAGGAGGAACGGAAGATGATCAGTGATGAGCATTGGTACCTGGATTTGCCGGAGCTGAAGGAGA
AAGAGAGCTTCATCATAGAAGAGCAGAGCTTCTCCCTGTGTGAAGATCTTCTCTACGGAAGGATGTCATTCAGGGGGTTT
AATCCTGAAGTTGAGAAGTTAATGCTTCAGATGAATTCCAAGAACAGAGCGGAGGCAGCAGAAGAGGAGGAGACTGTAGA
GGTCGACGTGTCAGATGAAGAAATGGCAAGAAGATATGAGACTTTGGTGGGAACAATTGGAAAAAAGTTTGCCAAGAAAA
GGGACCGAGCAAATTACGAAGAAGATGAAAATGGAAATATAAAGGCCATTAAAACTAAGAAGATGTTCTTAAAGCCCCAA
GACTGA
ATGGCGTCGGAGCGGAAGACTAAGTTATCCAAGAACTTGCTGCGCATGAAGTTCATGCAGAGGGGCCTGGACTCGGAAAC
CAAGAAACAGCTAGAAGAGGAGGAACGGAAGATGATCAGTGATGAGCATTGGTACCTGGATTTGCCGGAGCTGAAGGAGA
AAGAGAGCTTCATCATAGAAGAGCAGAGCTTCTCCCTGTGTGAAGATCTTCTCTACGGAAGGATGTCATTCAGGGGGTTT
AATCCTGAAGTTGAGAAGTTAATGCTTCAGATGAATTCCAAGAACAGAGCGGAGGCAGCAGAAGAGGAGGAGACTGTAGA
GGTCGACGTGTCAGATGAAGAAATGGCAAGAAGATATGAGACTTTGGTGGGAACAATTGGAAAAAAGTTTGCCAAGAAAA
GGGACCGAGCAAATTACGAAGAAGATGAAAATGGAAATATAAAGGCCATTAAAACTAAGAAGATGTTCTTAAAGCCCCAA
GACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 4 .98 RPM |
| SRP017611_kidney | 9 .14 RPM |
| SRP017611_brain | 16 .25 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009746 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000000127 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000016498 | ortholog_one2many | 5 retrogenes | |
| Dipodomys ordii | ENSDORG00000011060 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000010276 | ortholog_one2many | 6 retrogenes | |
| Homo sapiens | ENSG00000135698 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001405 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000000580 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000268 | ortholog_many2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022575 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000031843 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000010725 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000024341 | ortholog_many2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000012532 | ortholog_one2many | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000007592 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008398 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000019608 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000013110 | ortholog_many2many | 8 retrogenes | |
| Tarsius syrichta | ENSTSYG00000001928 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1760 | 78.57 | 59.63 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2298 | 77.30 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_2318 | 83.85 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_2320 | 86.34 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_rnor_2390 | 77.30 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_rnor_2391 | 83.23 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000050087 retrocopies