Parental gene:

MPHOSPH6, ENSOCUG00000024341

Aliases:None
Description:M-phase phosphoprotein 6 [Source:HGNC Symbol;Acc:7214]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:5:36376269..36392932(-)


>ENSOCUG00000024341
ATGGCGGCCGAGCGCAAGACCAAGTTGTCCAAGAACTTGCTGCGCATGAAGTTCATGCAAAGGGGATTGGACTCGGAAAC
CAAGAAGCAGCTCGAAGAGGAAGAGAAGAAGATCATTAGTGAAGAACACTGGTACTTGGATTTGCCAGAGCTGAAAGAGA
AAGAGAGTTTGATAATAGAAGAGCAGAGTTTCTTGTTGTGTGAAGATCTTCTCTATGGAAGAATGTCATTCAGAGGATTT
AATCCTGAGGTTGAGAAATTAATGCTTCAGATGAATGGGAAGAAGAAAGCAGCCGAGGAGGTTGAAGAGGAAGCAGTGGA
GCTTGATGTGTCGGATGAAGAGATGGCTAGAAGATATGAGACTTTGGTGGGGACAATTGGAAAAAAGTTTGCCAAGAAGA
GAGACCGTGCCAATTATGAAGAAGATGAGAATGGAGACATGCAGCCCATCAAAGCAAAGAAGATGTTCCTAAAGCCCCGA
GACTGA

Library Parental gene expression (RPM)
SRP017611_liver 4 .32 RPM
SRP017611_kidney 12 .06 RPM
SRP017611_brain 21 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009746 possible_ortholog 1 retrogene
retro_btau_591,
Choloepus hoffmanni ENSCHOG00000000127 ortholog_one2one 2 retrogenes
retro_chof_1602, retro_chof_740,
Callithrix jacchus ENSCJAG00000016498 ortholog_one2one 5 retrogenes
retro_cjac_1730, retro_cjac_2976, retro_cjac_3135, retro_cjac_3136, retro_cjac_3283,
Dipodomys ordii ENSDORG00000011060 ortholog_one2one 2 retrogenes
retro_dord_62, retro_dord_63,
Echinops telfairi ENSETEG00000010276 ortholog_one2many 6 retrogenes
retro_etel_1269, retro_etel_1300, retro_etel_1307, retro_etel_749, retro_etel_795, retro_etel_855,
Homo sapiens ENSG00000135698 ortholog_one2one 1 retrogene
retro_hsap_353,
Gorilla gorilla ENSGGOG00000001405 ortholog_one2one 1 retrogene
retro_ggor_367,
Macropus eugenii ENSMEUG00000000580 ortholog_one2many 1 retrogene
retro_meug_726,
Myotis lucifugus ENSMLUG00000000268 possible_ortholog 1 retrogene
retro_mluc_78,
Macaca mulatta ENSMMUG00000022575 ortholog_one2one 2 retrogenes
retro_mmul_1786, retro_mmul_471,
Mus musculus ENSMUSG00000031843 ortholog_one2many 2 retrogenes
retro_mmus_1998, retro_mmus_3662,
Nomascus leucogenys ENSNLEG00000010725 ortholog_one2one 1 retrogene
retro_nleu_2264,
Otolemur garnettii ENSOGAG00000012532 ortholog_one2one 3 retrogenes
retro_ogar_1288, retro_ogar_1382, retro_ogar_583,
Pongo abelii ENSPPYG00000007592 ortholog_one2one 1 retrogene
retro_pabe_348,
Pan troglodytes ENSPTRG00000008398 ortholog_one2one 1 retrogene
retro_ptro_277,
Rattus norvegicus ENSRNOG00000050087 ortholog_many2many 6 retrogenes
retro_rnor_1760, retro_rnor_2298, retro_rnor_2318, retro_rnor_2320, retro_rnor_2390, retro_rnor_2391,
Ictidomys tridecemlineatus ENSSTOG00000019608 possible_ortholog 1 retrogene
retro_itri_1186,
Tupaia belangeri ENSTBEG00000013110 possible_ortholog 8 retrogenes
retro_tbel_1037, retro_tbel_1812, retro_tbel_3027, retro_tbel_32, retro_tbel_333, retro_tbel_4213, retro_tbel_4385, retro_tbel_4415,
Tarsius syrichta ENSTSYG00000001928 ortholog_one2one 2 retrogenes
retro_tsyr_1511, retro_tsyr_906,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_749 57.95 54.04
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2. retro_ocun_1042 70.34 87.58
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Download FASTA sequences of all ENSOCUG00000024341 retrocopies