Parental gene:

Nkap, ENSRNOG00000031169

Aliases:Nkap, 2610020o08rik
Description:NF-kappa-B-activating protein [Source:UniProtKB/Swiss-Prot;Acc:Q4V7C9]
Organism:Rat (Rattus norvegicus)
Coordinates:X:123887439..123907038(+)


>ENSRNOG00000031169
ATGGCTCCTGTGTCGGGCTCGCGTAGCCCTGTACGGGAGGCCTCCGGGGGAAAGCGTCGCAGTTCGTCGAGGAGCCCCAA
ATCCATCAAATCTTCCCGCTCCCCGCGATGTCGCCGGTCTCGCTCGCGCTCTTGTTCTCGGTTCGGTGACCGGAATGGCC
TCAGCCATTCGCTGAGTGGCTTCAGCCAAAGCTCTCGAAACCAATCTTATCGCTCCCGCTCTCGATCGCGTTCTCGAGAA
CGGCCTTCTGCACAGCGGAGTGCCCCGTTCGCGTCTTCATCCTCGTCCGCCTATTATGGCGGCTACTCGCGTCCCTACGG
GGGTGACAAGCCATGGCCTAGCCTGCTGGACAAGGAAAGGGAGGAGAGTCTGCGGCAGAAGAGATTAAGTGAAAGAGAGA
GGATTGGAGAATTGGGAGCTCCTGAAGTTTGGGGACTTTCCCCAAAGAATCCTGAACCAGACTCTGATGAACATACACCA
GTAGAGGATGAAGAACCAAAGAAAAGCACTACTTCAGCATCTAGTTCGGAAGATGATAAGAAGAAGAAAAGGAAATCTAG
TCGTTCAAAAGAAAGAGCCAAGAAAAAGAGAAAGAAAAAGTCATCTAAAAGAAAACATAAGAAGTATTCTGAAGATAGCG
ACAGTGACTCAGAGTCTGACACCGACTCTAGTGATGAAGATTCAAAAAGAAGAGCAAAGAAAGCTAAGAAAAAGGAAAAG
AAGAAGAAACGAAGAGGGAAGAAATACAAGAAAAAGAAGTCTAAGAAAAACAGAAAGGAGTCCAGTGATTCAAGCTCTAA
AGAGTCCCAAGAAGAATTTCTAGAGAATCCGTGGAAGGATCGATCAAAGACAGAAGAACCATCAGATCTGATTGGCCCAG
AGGCTCCCAAAACACTTGCCTCCCAAGATGATAAGCCCTTGAACTATGGCCACGCCCTGTTACCTGGTGAAGGTGCAGCT
ATGGCTGAATATGTAAAAGCTGGCAAGCGTATCCCGAGAAGAGGTGAAATCGGCTTAACAAGTGAAGAGATCGCATCATT
CGAATGTTCCGGTTATGTAATGAGCGGCAGCAGGCATCGCCGAATGGAGGCTGTCCGACTTCGGAAAGAGAACCAGATCT
ACAGTGCCGATGAGAAGAGAGCCCTTGCCTCCTTTAACCAAGAAGAAAGACGGAAGAGGGAGAACAAGATTCTGGCCAGC
TTTCGCGAGATGGTGTACAGAAAGACCAAAGGGAAGGATGACAAGTGA

Library Parental gene expression (RPM)
SRP017611_liver 8 .07 RPM
SRP017611_kidney 15 .49 RPM
SRP017611_brain 14 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018433 ortholog_one2one 1 retrogene
retro_cfam_172,
Dasypus novemcinctus ENSDNOG00000000072 ortholog_one2one 1 retrogene
retro_dnov_50,
Echinops telfairi ENSETEG00000001007 ortholog_one2many 1 retrogene
retro_etel_1882,
Felis catus ENSFCAG00000004392 ortholog_one2one 1 retrogene
retro_fcat_10,
Homo sapiens ENSG00000101882 ortholog_one2one 1 retrogene
retro_hsap_15,
Loxodonta africana ENSLAFG00000002962 ortholog_one2one 1 retrogene
retro_lafr_37,
Macaca mulatta ENSMMUG00000012382 ortholog_one2one 1 retrogene
retro_mmul_121,
Mus musculus ENSMUSG00000016409 ortholog_one2one 1 retrogene
retro_mmus_279,
Nomascus leucogenys ENSNLEG00000014922 ortholog_one2one 1 retrogene
retro_nleu_88,
Otolemur garnettii ENSOGAG00000001004 ortholog_one2one 1 retrogene
retro_ogar_239,
Pongo abelii ENSPPYG00000020679 ortholog_one2one 1 retrogene
retro_pabe_198,
Pan troglodytes ENSPTRG00000022233 ortholog_one2one 1 retrogene
retro_ptro_117,
Sus scrofa ENSSSCG00000012613 ortholog_one2one 1 retrogene
retro_sscr_13,
Ictidomys tridecemlineatus ENSSTOG00000001134 ortholog_one2one 1 retrogene
retro_itri_73,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_93 68.80 82.41
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Download FASTA sequences of all ENSRNOG00000031169 retrocopies