Parental gene:

Nkap, ENSMUSG00000016409

Aliases:Nkap, 2610020O08Rik, AA987160, AI849147, AL024236
Description:NFKB activating protein [Source:MGI Symbol;Acc:MGI:1914300]
Organism:Mouse (Mus musculus)
Coordinates:X:37126794..37150746(+)


>ENSMUSG00000016409
ATGGCTCCTGTATCGGGCTCGCGTAGCCCTGAACGGGAGGCCTCCGGGGCGAAGCGTCGCAGTCCATCGCGGAGCCCCAA
ATCCATCAAATCTTCCCGCTCCCCGCGGTGTCGCCGGTCTCGCTCGCGCTCTTGTTCTCGGTTCGGCGACCGGAATGGCC
TCAGTCATTCGCTGAGTGGCTTCAGCCAAAGCTCCCGAAACCAATCTTACCGCTCCCGCTCTCGATCGCGCTCTCGCGAA
CGGCCCTCGGCACAGCGGAGCGCCCCGTTTGCTTCTGCATCCTCGTCCGCCTATTACGGCGGCTACTCGCGTCCCTACGG
GGGCGACAAGCCATGGCCTAGCCTGCTGGACAAGGAAAGGGAGGAGAGTCTCCGGCAGAAGAGATTAAGTGAAAGAGAGA
GGATTGGAGAATTGGGAGCTCCTGAAGTTTGGGGACTTTCCCCAAAGAATCCTGAACCAGACTCTGATGAACATACACCA
GTAGAGGATGAAGAACCAAAGAAAAGCACTACTTCAGCATCTAGTTCAGAAGATGATAAGAAGAAGAAAAGGAAATCTAG
TCATTCAAAAGACAGAGCCAAGAAAAAGAGAAAGAAAAAGTCATCTAAAAGAAAACATAAAAAGTATTCTGAAGATAGCG
ACAGTGACTCTGAATCTGACACAGACTCCAGCGATGAAGATTCAAAAAGAAGAGCAAAGAAAGCTAAGAAAAAGGACAAG
AAAAAGAAACGAAGAGGGAAGAAATACAAGAAAAAGAAGTCTAAGAAAAACAGAAAAGAGTCCAGTGATTCGAGCTCTAA
AGAGTCCCAAGAAGAATTTCTAGAGAATCCTTGGAAGGATCGATCAAAGGCAGAAGAACCATCAGATTTGATTGGCCCAG
AGGCTCCCAAAACTCTTGCCTCCCAAGATGATAAGCCTTTGAACTATGGCCACGCTCTGTTACCTGGTGAAGGCGCAGCT
ATGGCTGAATATGTAAAAGCTGGCAAGCGTATCCCAAGAAGAGGTGAAATTGGCTTGACAAGTGAAGAGATCGCATCATT
TGAATGTTCCGGTTACGTAATGAGTGGTAGCAGGCATCGCCGAATGGAGGCTGTTCGACTTCGGAAAGAGAACCAGATCT
ACAGTGCTGATGAGAAGAGAGCCCTTGCATCCTTTAACCAAGAAGAAAGACGAAAGAGGGAGAACAAGATTCTGGCCAGC
TTTCGTGAGATGGTATACAGAAAGACCAAAGGGAAGGATGACAAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 12 .27 RPM
SRP007412_cerebellum 13 .98 RPM
SRP007412_heart 7 .75 RPM
SRP007412_kidney 10 .30 RPM
SRP007412_liver 6 .28 RPM
SRP007412_testis 1 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018433 ortholog_one2one 1 retrogene
retro_cfam_172,
Dasypus novemcinctus ENSDNOG00000000072 ortholog_one2one 1 retrogene
retro_dnov_50,
Echinops telfairi ENSETEG00000001007 ortholog_one2many 1 retrogene
retro_etel_1882,
Felis catus ENSFCAG00000004392 ortholog_one2one 1 retrogene
retro_fcat_10,
Homo sapiens ENSG00000101882 ortholog_one2one 1 retrogene
retro_hsap_15,
Loxodonta africana ENSLAFG00000002962 ortholog_one2one 1 retrogene
retro_lafr_37,
Macaca mulatta ENSMMUG00000012382 ortholog_one2one 1 retrogene
retro_mmul_121,
Nomascus leucogenys ENSNLEG00000014922 ortholog_one2one 1 retrogene
retro_nleu_88,
Otolemur garnettii ENSOGAG00000001004 ortholog_one2one 1 retrogene
retro_ogar_239,
Pongo abelii ENSPPYG00000020679 ortholog_one2one 1 retrogene
retro_pabe_198,
Pan troglodytes ENSPTRG00000022233 ortholog_one2one 1 retrogene
retro_ptro_117,
Rattus norvegicus ENSRNOG00000031169 ortholog_one2one 1 retrogene
retro_rnor_93,
Sus scrofa ENSSSCG00000012613 ortholog_one2one 1 retrogene
retro_sscr_13,
Ictidomys tridecemlineatus ENSSTOG00000001134 ortholog_one2one 1 retrogene
retro_itri_73,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_279 68.79 82.89
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Download FASTA sequences of all ENSMUSG00000016409 retrocopies